RNA: ENST00000586967.1

CALR-204, Transcript of calreticulin, humanhuman

TSL 2

Gene CALR, Length 394 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-204ENST00000586967 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.92■□□□□ 0.144e-85■■■■■ 43.9
CALR-204ENST00000586967 UPF1Q92900 1129 aaKnown RBP eCLIP18.62■□□□□ 0.576e-25■■■■■ 35.5
CALR-204ENST00000586967 PCBP1Q15365 356 aaKnown RBP eCLIP16.24■□□□□ 0.195e-69■■■■■ 31
CALR-204ENST00000586967 TIA1P31483 386 aaKnown RBP eCLIP14.02□□□□□ -0.171e-29■■■■■ 27.8
CALR-204ENST00000586967 SND1Q7KZF4 910 aaKnown RBP eCLIP15.41■□□□□ 0.066e-28■■■■□ 22.2
CALR-204ENST00000586967 IGF2BP3O00425 579 aaKnown RBP eCLIP16.88■□□□□ 0.294e-12■■■■□ 20.3
CALR-204ENST00000586967 TIAL1Q01085 375 aaKnown RBP eCLIP14.45□□□□□ -0.12e-18■■■□□ 18.3
CALR-204ENST00000586967 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.69■■□□□ 1.063e-52■■■□□ 17.5
CALR-204ENST00000586967 RPS3P23396 243 aaKnown RBP eCLIP14.61□□□□□ -0.075e-80■■■□□ 16.3
CALR-204ENST00000586967 LARP4Q71RC2 724 aaKnown RBP eCLIP14.05□□□□□ -0.162e-53■■■□□ 15.6
CALR-204ENST00000586967 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.57■□□□□ 0.081e-17■■■□□ 15.6
CALR-204ENST00000586967 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.35■□□□□ 0.057e-19■■■□□ 15.5
CALR-204ENST00000586967 TROVE2P10155 538 aaKnown RBP eCLIP14.2□□□□□ -0.142e-77■■■□□ 15.3
CALR-204ENST00000586967 FTOQ9C0B1 505 aaKnown RBP eCLIP16.66■□□□□ 0.263e-67■■■□□ 15.1
CALR-204ENST00000586967 PRPF4O43172 522 aaKnown RBP eCLIP14.45□□□□□ -0.15e-22■■□□□ 14.3
CALR-204ENST00000586967 PCBP2Q15366 365 aaKnown RBP eCLIP14.31□□□□□ -0.121e-37■■□□□ 14.2
CALR-204ENST00000586967 ZNF622Q969S3 477 aaKnown RBP eCLIP18.16■□□□□ 0.55e-81■■□□□ 13.5
CALR-204ENST00000586967 FXR1P51114 621 aaKnown RBP eCLIP15.75■□□□□ 0.111e-18■■□□□ 13.4
CALR-204ENST00000586967 AQRO60306 1485 aaKnown RBP eCLIP24.26■■□□□ 1.471e-36■■□□□ 12.6
CALR-204ENST00000586967 AKAP1Q92667 903 aaKnown RBP eCLIP12.78□□□□□ -0.368e-10■■□□□ 12.4
CALR-204ENST00000586967 FXR2P51116 673 aaKnown RBP eCLIP16.64■□□□□ 0.258e-50■■□□□ 12
CALR-204ENST00000586967 NIPBLQ6KC79 2804 aaeCLIP11.44□□□□□ -0.584e-9■■□□□ 11.8
CALR-204ENST00000586967 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.42□□□□□ -0.265e-54■■□□□ 11.7
CALR-204ENST00000586967 G3BP1Q13283 466 aaKnown RBP eCLIP18.26■□□□□ 0.514e-19■■□□□ 11.7
CALR-204ENST00000586967 PABPC4Q13310 644 aaKnown RBP eCLIP17.11■□□□□ 0.333e-18■□□□□ 11.1
CALR-204ENST00000586967 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.85□□□□□ -0.193e-23■□□□□ 10.7
CALR-204ENST00000586967 WDR43Q15061 677 aaKnown RBP eCLIP19.71■□□□□ 0.754e-44■□□□□ 10.6
CALR-204ENST00000586967 SRSF1Q07955 248 aaKnown RBP eCLIP12.69□□□□□ -0.381e-40■□□□□ 10.5
CALR-204ENST00000586967 PUM1Q14671 1186 aaKnown RBP eCLIP13.94□□□□□ -0.187e-20■□□□□ 10.4
CALR-204ENST00000586967 DDX6P26196 483 aaKnown RBP eCLIP15.41■□□□□ 0.061e-41■□□□□ 10.2
CALR-204ENST00000586967 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.69■□□□□ 0.14e-15■□□□□ 9.9
CALR-204ENST00000586967 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.8□□□□□ -0.041e-45■□□□□ 9.5
CALR-204ENST00000586967 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.25■□□□□ 0.351e-16■□□□□ 9.5
CALR-204ENST00000586967 PTBP1P26599 531 aaKnown RBP eCLIP12.38□□□□□ -0.435e-29■□□□□ 9.5
CALR-204ENST00000586967 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.87■□□□□ 0.131e-31■□□□□ 9.3
CALR-204ENST00000586967 SUB1P53999 127 aaKnown RBP eCLIP11.68□□□□□ -0.543e-41■□□□□ 9.2
CALR-204ENST00000586967 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.41■□□□□ 0.73e-35■□□□□ 9
CALR-204ENST00000586967 PABPN1Q86U42 306 aaKnown RBP eCLIP27.21■■□□□ 1.953e-7■□□□□ 8.9
CALR-204ENST00000586967 RBM15Q96T37 977 aaKnown RBP eCLIP14.91□□□□□ -0.023e-54■□□□□ 8.4
CALR-204ENST00000586967 RBM5P52756 815 aaKnown RBP eCLIP17.65■□□□□ 0.424e-26■□□□□ 8.3
CALR-204ENST00000586967 GRSF1Q12849 480 aaKnown RBP eCLIP15.01□□□□□ -0.014e-39■□□□□ 8.2
Retrieved 41 of 41 RNA–protein pairs in 25.1 ms