RNA: ENST00000586833.5

TPM4-205, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-205ENST00000586833 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.5■■□□□ 1.038e-48■■■■□ 23.3
TPM4-205ENST00000586833 TIA1P31483 386 aaKnown RBP eCLIP13.2□□□□□ -0.31e-15■■□□□ 12.5
TPM4-205ENST00000586833 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.09□□□□□ -0.476e-14■□□□□ 10.6
TPM4-205ENST00000586833 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.77■□□□□ 0.122e-12■■□□□ 12.2
TPM4-205ENST00000586833 DDX3XO00571 662 aaKnown RBP eCLIP14.61□□□□□ -0.073e-12■■■■□ 25.2
TPM4-205ENST00000586833 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.69□□□□□ -0.067e-12■■■■■ 49
TPM4-205ENST00000586833 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.14■□□□□ 0.332e-11■□□□□ 8.1
TPM4-205ENST00000586833 PUM1Q14671 1186 aaKnown RBP eCLIP14.18□□□□□ -0.142e-10■■□□□ 13.3
TPM4-205ENST00000586833 PRPF4O43172 522 aaKnown RBP eCLIP13.52□□□□□ -0.252e-10■■□□□ 13.2
TPM4-205ENST00000586833 EIF4G2P78344 907 aaKnown RBP eCLIP19.74■□□□□ 0.753e-9■■■□□ 15.5
TPM4-205ENST00000586833 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.18□□□□□ -0.33e-9■■■□□ 17.9
TPM4-205ENST00000586833 SF3B4Q15427 424 aaKnown RBP eCLIP12.91□□□□□ -0.342e-8■■■■□ 22.2
TPM4-205ENST00000586833 NONOQ15233 471 aaKnown RBP eCLIP16.06■□□□□ 0.162e-8■■■■■ 32.1
TPM4-205ENST00000586833 U2AF2P26368 475 aaKnown RBP eCLIP15.9■□□□□ 0.143e-8■□□□□ 9.8
TPM4-205ENST00000586833 NKRFO15226 690 aaKnown RBP eCLIP16.21■□□□□ 0.193e-8■■■□□ 18
TPM4-205ENST00000586833 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.94■□□□□ 0.623e-8■■□□□ 13.3
TPM4-205ENST00000586833 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.63■□□□□ 0.096e-8■□□□□ 9.1
TPM4-205ENST00000586833 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.08■□□□□ 07e-8■■■■□ 22.9
TPM4-205ENST00000586833 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.7□□□□□ -0.061e-7■■■■■ 26.8
TPM4-205ENST00000586833 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.07□□□□□ -0.162e-7■■□□□ 14.5
TPM4-205ENST00000586833 FXR2P51116 673 aaKnown RBP eCLIP15.79■□□□□ 0.122e-7■□□□□ 10.7
TPM4-205ENST00000586833 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.4■□□□□ 0.223e-7■□□□□ 8.7
TPM4-205ENST00000586833 EFTUD2Q15029 972 aaKnown RBP eCLIP13.57□□□□□ -0.244e-7■■■■□ 25
TPM4-205ENST00000586833 DDX21Q9NR30 783 aaKnown RBP eCLIP18.2■□□□□ 0.54e-7■■□□□ 12.4
TPM4-205ENST00000586833 ZNF622Q969S3 477 aaKnown RBP eCLIP17.98■□□□□ 0.474e-7■■□□□ 11.9
TPM4-205ENST00000586833 G3BP1Q13283 466 aaKnown RBP eCLIP17.5■□□□□ 0.395e-7■□□□□ 11.1
TPM4-205ENST00000586833 SF3B1O75533 1304 aaKnown RBP eCLIP15.35■□□□□ 0.056e-7■■■■■ 83
TPM4-205ENST00000586833 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13□□□□□ -0.336e-7■■■□□ 19.1
TPM4-205ENST00000586833 AQRO60306 1485 aaKnown RBP eCLIP24.13■■□□□ 1.457e-7■■■■□ 20.3
TPM4-205ENST00000586833 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.27■■□□□ 19e-7■■□□□ 13.8
TPM4-205ENST00000586833 EWSR1Q01844 656 aaKnown RBP eCLIP10.53□□□□□ -0.721e-6■■■□□ 16.2
TPM4-205ENST00000586833 DDX6P26196 483 aaKnown RBP eCLIP14.99□□□□□ -0.011e-6■□□□□ 10.8
TPM4-205ENST00000586833 SF3A3Q12874 501 aaKnown RBP eCLIP12.81□□□□□ -0.361e-6■■■■■ 41.8
TPM4-205ENST00000586833 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.77□□□□□ -0.051e-6■■■□□ 14.8
TPM4-205ENST00000586833 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.2■■□□□ 1.141e-6■■□□□ 14.3
TPM4-205ENST00000586833 GPKOWQ92917 476 aaPredicted RBP eCLIP16.2■□□□□ 0.181e-6■■□□□ 12.4
TPM4-205ENST00000586833 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.59□□□□□ -0.551e-6■■□□□ 13.1
TPM4-205ENST00000586833 WDR43Q15061 677 aaKnown RBP eCLIP18.75■□□□□ 0.591e-6■□□□□ 11.1
TPM4-205ENST00000586833 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.57□□□□□ -0.081e-6■■■□□ 19.1
TPM4-205ENST00000586833 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.65□□□□□ -0.221e-6■■■■■ 56.2
TPM4-205ENST00000586833 GTF2F1P35269 517 aaKnown RBP eCLIP15.21■□□□□ 0.031e-6■■■■□ 21.5
TPM4-205ENST00000586833 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.68■□□□□ 0.262e-6■■■■■ 29.8
TPM4-205ENST00000586833 LSM11P83369 360 aaKnown RBP eCLIP12.35□□□□□ -0.432e-6■□□□□ 9.8
TPM4-205ENST00000586833 SRSF1Q07955 248 aaKnown RBP eCLIP12.76□□□□□ -0.372e-6■□□□□ 8.5
TPM4-205ENST00000586833 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.26■□□□□ 0.032e-6■■■■■ 40.6
TPM4-205ENST00000586833 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.02■□□□□ -03e-6■■■■■ 34.2
TPM4-205ENST00000586833 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.34■□□□□ 0.213e-6■■■■■ 31.9
TPM4-205ENST00000586833 NIPBLQ6KC79 2804 aaeCLIP11.53□□□□□ -0.566e-6■■■□□ 16.7
TPM4-205ENST00000586833 RBM5P52756 815 aaKnown RBP eCLIP17.31■□□□□ 0.368e-6■■■■□ 20.7
TPM4-205ENST00000586833 DDX42Q86XP3 938 aaKnown RBP eCLIP14.89□□□□□ -0.039e-6■□□□□ 9.6
Retrieved 50 of 50 RNA–protein pairs in 30 ms