RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 AGGF1Q8N302 714 aaeCLIP10.28□□□□□ -0.765e-8■■■■■ 114.4
CSNK1D-226ENST00000585026 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.96□□□□□ -0.497e-8■■■■■ 49.6
CSNK1D-226ENST00000585026 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.2□□□□□ -0.32e-11■■■■■ 46.5
CSNK1D-226ENST00000585026 SF3B4Q15427 424 aaKnown RBP eCLIP9.92□□□□□ -0.824e-13■■■■■ 44.6
CSNK1D-226ENST00000585026 SF3B1O75533 1304 aaKnown RBP eCLIP11.89□□□□□ -0.516e-7■■■■■ 43.1
CSNK1D-226ENST00000585026 FTOQ9C0B1 505 aaKnown RBP eCLIP12.61□□□□□ -0.393e-10■■■■■ 39.9
CSNK1D-226ENST00000585026 GTF2F1P35269 517 aaKnown RBP eCLIP12.23□□□□□ -0.451e-7■■■■■ 38.7
CSNK1D-226ENST00000585026 WRNQ14191 1432 aaPredicted RBP eCLIP19.22■□□□□ 0.675e-6■■■■■ 38.2
CSNK1D-226ENST00000585026 SAFB2Q14151 953 aaKnown RBP eCLIP15.81■□□□□ 0.121e-12■■■■■ 37.9
CSNK1D-226ENST00000585026 PRPF4O43172 522 aaKnown RBP eCLIP10.25□□□□□ -0.771e-6■■■■■ 36
CSNK1D-226ENST00000585026 AARSP49588 968 aaKnown RBP eCLIP11.63□□□□□ -0.555e-7■■■■■ 34.9
CSNK1D-226ENST00000585026 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.36□□□□□ -0.595e-7■■■■■ 34.9
CSNK1D-226ENST00000585026 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.93□□□□□ -0.662e-12■■■■■ 34.1
CSNK1D-226ENST00000585026 HNRNPLP14866 589 aaKnown RBP eCLIP11.37□□□□□ -0.592e-7■■■■■ 32.8
CSNK1D-226ENST00000585026 HNRNPMP52272 730 aaKnown RBP eCLIP17.33■□□□□ 0.362e-7■■■■■ 32.8
CSNK1D-226ENST00000585026 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.24□□□□□ -0.775e-10■■■■■ 31.1
CSNK1D-226ENST00000585026 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.24□□□□□ -0.291e-7■■■■■ 30
CSNK1D-226ENST00000585026 PCBP2Q15366 365 aaKnown RBP eCLIP9.92□□□□□ -0.823e-8■■■■■ 30
CSNK1D-226ENST00000585026 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.97■□□□□ 0.313e-11■■■■■ 27.3
CSNK1D-226ENST00000585026 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.51□□□□□ -0.733e-8■■■■□ 26.7
CSNK1D-226ENST00000585026 FUSP35637 526 aaKnown RBP eCLIP7.29□□□□□ -1.244e-7■■■■□ 25
CSNK1D-226ENST00000585026 SMNDC1O75940 238 aaKnown RBP eCLIP9.73□□□□□ -0.854e-6■■■■□ 24.8
CSNK1D-226ENST00000585026 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.64□□□□□ -0.391e-6■■■■□ 21.8
CSNK1D-226ENST00000585026 RBFOX2O43251 390 aaKnown RBP eCLIP8.27□□□□□ -1.091e-7■■■■□ 21.6
CSNK1D-226ENST00000585026 SF3A3Q12874 501 aaKnown RBP eCLIP9.82□□□□□ -0.844e-13■■■■□ 21.5
CSNK1D-226ENST00000585026 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.28□□□□□ -0.762e-7■■■■□ 21.4
CSNK1D-226ENST00000585026 ZRANB2O95218 330 aaKnown RBP eCLIP10.6□□□□□ -0.716e-6■■■■□ 21
CSNK1D-226ENST00000585026 TARDBPQ13148 414 aaKnown RBP eCLIP11.09□□□□□ -0.633e-6■■■■□ 20.8
CSNK1D-226ENST00000585026 PPIGQ13427 754 aaKnown RBP eCLIP12.82□□□□□ -0.366e-22■■■■□ 20.1
CSNK1D-226ENST00000585026 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.77□□□□□ -1.018e-7■■■■□ 19.3
CSNK1D-226ENST00000585026 NONOQ15233 471 aaKnown RBP eCLIP12.03□□□□□ -0.482e-6■■■□□ 18.4
CSNK1D-226ENST00000585026 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.11□□□□□ -0.953e-7■■■□□ 17.6
CSNK1D-226ENST00000585026 YBX3P16989 372 aaKnown RBP eCLIP14.88□□□□□ -0.032e-6■■■□□ 17
CSNK1D-226ENST00000585026 AQRO60306 1485 aaKnown RBP eCLIP19.67■□□□□ 0.745e-8■■■□□ 15.9
CSNK1D-226ENST00000585026 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.4□□□□□ -0.749e-6■■■□□ 15.7
CSNK1D-226ENST00000585026 EWSR1Q01844 656 aaKnown RBP eCLIP8.1□□□□□ -1.115e-7■■■□□ 15.7
CSNK1D-226ENST00000585026 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.95□□□□□ -0.344e-6■■■□□ 14.8
CSNK1D-226ENST00000585026 DDX3XO00571 662 aaKnown RBP eCLIP10.85□□□□□ -0.673e-16■■■□□ 14.7
CSNK1D-226ENST00000585026 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.77□□□□□ -0.375e-22■■■□□ 14.7
CSNK1D-226ENST00000585026 BCCIPQ9P287 314 aaKnown RBP eCLIP11.45□□□□□ -0.588e-7■■□□□ 14.4
CSNK1D-226ENST00000585026 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.42□□□□□ -0.98e-12■■□□□ 14.3
CSNK1D-226ENST00000585026 DDX21Q9NR30 783 aaKnown RBP eCLIP14.12□□□□□ -0.156e-8■■□□□ 13.9
CSNK1D-226ENST00000585026 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.9□□□□□ -0.821e-8■■□□□ 13.8
CSNK1D-226ENST00000585026 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.05□□□□□ -0.642e-8■■□□□ 13.7
CSNK1D-226ENST00000585026 HNRNPCP07910 306 aaKnown RBP eCLIP8.3□□□□□ -1.082e-7■■□□□ 13.4
CSNK1D-226ENST00000585026 NCBP2P52298 156 aaKnown RBP eCLIP9.59□□□□□ -0.871e-11■■□□□ 12.6
CSNK1D-226ENST00000585026 TAF15Q92804 592 aaKnown RBP eCLIP8.94□□□□□ -0.986e-6■■□□□ 12.5
CSNK1D-226ENST00000585026 EFTUD2Q15029 972 aaKnown RBP eCLIP10.16□□□□□ -0.781e-6■■□□□ 11.5
CSNK1D-226ENST00000585026 SRSF1Q07955 248 aaKnown RBP eCLIP10.72□□□□□ -0.696e-8■■□□□ 11.5
CSNK1D-226ENST00000585026 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.78□□□□□ -0.367e-6■□□□□ 10.8
CSNK1D-226ENST00000585026 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.17□□□□□ -0.622e-6■□□□□ 10.6
CSNK1D-226ENST00000585026 UPF1Q92900 1129 aaKnown RBP eCLIP16.25■□□□□ 0.194e-6■□□□□ 10.4
CSNK1D-226ENST00000585026 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.51□□□□□ -0.731e-7■□□□□ 10.2
CSNK1D-226ENST00000585026 ZNF622Q969S3 477 aaKnown RBP eCLIP14.42□□□□□ -0.19e-8■□□□□ 10
CSNK1D-226ENST00000585026 XRCC6P12956 609 aaKnown RBP eCLIP11.87□□□□□ -0.513e-10■□□□□ 9.9
CSNK1D-226ENST00000585026 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.92□□□□□ -0.345e-10■□□□□ 9.7
CSNK1D-226ENST00000585026 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.08□□□□□ -0.649e-8■□□□□ 9.5
CSNK1D-226ENST00000585026 METAP2P50579 478 aaKnown RBP eCLIP12.09□□□□□ -0.478e-7■□□□□ 9.4
CSNK1D-226ENST00000585026 HNRNPUQ00839 825 aaKnown RBP eCLIP13.52□□□□□ -0.253e-18■□□□□ 9.1
CSNK1D-226ENST00000585026 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.78■□□□□ 0.288e-9■□□□□ 9
CSNK1D-226ENST00000585026 RBM22Q9NW64 420 aaKnown RBP eCLIP10.58□□□□□ -0.724e-7■□□□□ 8.6
CSNK1D-226ENST00000585026 U2AF2P26368 475 aaKnown RBP eCLIP11.71□□□□□ -0.539e-9■□□□□ 8.3
Retrieved 62 of 62 RNA–protein pairs in 45.5 ms