RNA: ENST00000577988.2

SNORD3B-1-201, Transcript of small nucleolar RNA, C/D box 3B-1, humanhuman

BASIC

Gene SNORD3B-1, Length 758 nt, Biotype snoRNA, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3B-1-201ENST00000577988 AATFQ9NY61 560 aaKnown RBP eCLIP16.81■□□□□ 0.281e-323■■■■■ 2362.2
SNORD3B-1-201ENST00000577988 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.41□□□□□ -0.264e-95■■■■■ 329.3
SNORD3B-1-201ENST00000577988 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.37□□□□□ -0.112e-62■■■■■ 400.9
SNORD3B-1-201ENST00000577988 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.97□□□□□ -0.014e-58■■■■■ 510.1
SNORD3B-1-201ENST00000577988 XRCC6P12956 609 aaKnown RBP eCLIP15.59■□□□□ 0.092e-54■■■■■ 248.2
SNORD3B-1-201ENST00000577988 DDX3XO00571 662 aaKnown RBP eCLIP14.44□□□□□ -0.19e-54■■■■■ 339.3
SNORD3B-1-201ENST00000577988 DKC1O60832 514 aaKnown RBP eCLIP15.66■□□□□ 0.12e-52■■■■■ 77.2
SNORD3B-1-201ENST00000577988 PCBP1Q15365 356 aaKnown RBP eCLIP15.44■□□□□ 0.062e-51■■■■■ 154.9
SNORD3B-1-201ENST00000577988 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.73□□□□□ -0.218e-43■■■■■ 229.3
SNORD3B-1-201ENST00000577988 NKRFO15226 690 aaKnown RBP eCLIP15.96■□□□□ 0.151e-37■■■■■ 140.6
SNORD3B-1-201ENST00000577988 DDX21Q9NR30 783 aaKnown RBP eCLIP17.98■□□□□ 0.471e-36■■■■■ 138.5
SNORD3B-1-201ENST00000577988 RPS11P62280 158 aaKnown RBP eCLIP11.57□□□□□ -0.561e-35■■■■■ 95
SNORD3B-1-201ENST00000577988 DDX6P26196 483 aaKnown RBP eCLIP14.73□□□□□ -0.051e-34■■■■■ 202.4
SNORD3B-1-201ENST00000577988 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.49■□□□□ 0.232e-34■■■■■ 157.7
SNORD3B-1-201ENST00000577988 WDR43Q15061 677 aaKnown RBP eCLIP18.45■□□□□ 0.543e-34■■■■■ 689.1
SNORD3B-1-201ENST00000577988 SF3B4Q15427 424 aaKnown RBP eCLIP12.65□□□□□ -0.383e-34■■■■■ 160.9
SNORD3B-1-201ENST00000577988 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.86■□□□□ 0.297e-34■■■■■ 184.2
SNORD3B-1-201ENST00000577988 RPS3P23396 243 aaKnown RBP eCLIP13.64□□□□□ -0.238e-32■■■■■ 34.9
SNORD3B-1-201ENST00000577988 GPKOWQ92917 476 aaPredicted RBP eCLIP15.97■□□□□ 0.151e-29■■■■■ 41.3
SNORD3B-1-201ENST00000577988 NCBP2P52298 156 aaKnown RBP eCLIP12.87□□□□□ -0.356e-29■■■■■ 103.3
SNORD3B-1-201ENST00000577988 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.7■□□□□ 0.262e-28■■■■■ 27.5
SNORD3B-1-201ENST00000577988 EIF3HO15372 352 aaKnown RBP eCLIP13.63□□□□□ -0.233e-27■■■■■ 123
SNORD3B-1-201ENST00000577988 PUS1Q9Y606 427 aaKnown RBP eCLIP10.51□□□□□ -0.731e-26■■■■■ 120
SNORD3B-1-201ENST00000577988 TROVE2P10155 538 aaKnown RBP eCLIP12.77□□□□□ -0.372e-26■■■■■ 143.5
SNORD3B-1-201ENST00000577988 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.67□□□□□ -0.063e-25■■■■■ 327.1
SNORD3B-1-201ENST00000577988 SMNDC1O75940 238 aaKnown RBP eCLIP12.37□□□□□ -0.435e-24■■■■■ 82
SNORD3B-1-201ENST00000577988 METAP2P50579 478 aaKnown RBP eCLIP16.09■□□□□ 0.171e-23■■■■■ 65
SNORD3B-1-201ENST00000577988 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.53■□□□□ 0.081e-23■■■■■ 47.8
SNORD3B-1-201ENST00000577988 FKBP4Q02790 459 aaKnown RBP eCLIP17.5■□□□□ 0.393e-22■■■■■ 129.2
SNORD3B-1-201ENST00000577988 TRA2AQ13595 282 aaKnown RBP eCLIP13.58□□□□□ -0.242e-21■■■■■ 72.8
SNORD3B-1-201ENST00000577988 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.87□□□□□ -0.034e-20■■■■■ 931.7
SNORD3B-1-201ENST00000577988 RBM22Q9NW64 420 aaKnown RBP eCLIP14.05□□□□□ -0.169e-19■■■■■ 91.8
SNORD3B-1-201ENST00000577988 NOLC1Q14978 699 aaKnown RBP eCLIP15.21■□□□□ 0.033e-18■■■■■ 51.9
SNORD3B-1-201ENST00000577988 ZRANB2O95218 330 aaKnown RBP eCLIP14.14□□□□□ -0.151e-16■■■■■ 74.9
SNORD3B-1-201ENST00000577988 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.56□□□□□ -0.081e-16■■■■■ 58.7
SNORD3B-1-201ENST00000577988 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.29□□□□□ -0.281e-15■■■■■ 220.2
SNORD3B-1-201ENST00000577988 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.97□□□□□ -0.333e-15■■■■■ 484.2
SNORD3B-1-201ENST00000577988 NPM1P06748 294 aaKnown RBP eCLIP22.67■■□□□ 1.223e-15■■■■■ 90.5
SNORD3B-1-201ENST00000577988 QKIQ96PU8 341 aaKnown RBP eCLIP14□□□□□ -0.173e-15■■■■■ 59.2
SNORD3B-1-201ENST00000577988 POLR2GP62487 172 aaKnown RBP eCLIP10.54□□□□□ -0.723e-13■■■■■ 60.1
SNORD3B-1-201ENST00000577988 SF3A3Q12874 501 aaKnown RBP eCLIP12.61□□□□□ -0.393e-13■■■■■ 47
SNORD3B-1-201ENST00000577988 EIF3GO75821 320 aaKnown RBP eCLIP10.03□□□□□ -0.84e-13■■■■■ 60.4
SNORD3B-1-201ENST00000577988 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.78□□□□□ -0.045e-13■■■■■ 484.6
SNORD3B-1-201ENST00000577988 SND1Q7KZF4 910 aaKnown RBP eCLIP14.44□□□□□ -0.17e-13■■■■■ 47.3
SNORD3B-1-201ENST00000577988 U2AF1Q01081 240 aaKnown RBP eCLIP18.56■□□□□ 0.561e-12■■■■■ 42.5
SNORD3B-1-201ENST00000577988 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.07■□□□□ 0.162e-12■■■■■ 172.7
SNORD3B-1-201ENST00000577988 RBFOX2O43251 390 aaKnown RBP eCLIP10.97□□□□□ -0.652e-12■■■■■ 43.7
SNORD3B-1-201ENST00000577988 GRSF1Q12849 480 aaKnown RBP eCLIP14.47□□□□□ -0.093e-12■■■■■ 43.8
SNORD3B-1-201ENST00000577988 DDX42Q86XP3 938 aaKnown RBP eCLIP14.63□□□□□ -0.074e-12■■■■■ 60.5
SNORD3B-1-201ENST00000577988 NSUN2Q08J23 767 aaKnown RBP eCLIP14.13□□□□□ -0.157e-12■□□□□ 9.7
SNORD3B-1-201ENST00000577988 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.76□□□□□ -0.378e-12■■■■■ 60
SNORD3B-1-201ENST00000577988 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.6□□□□□ -0.072e-11■■■■■ 59.2
SNORD3B-1-201ENST00000577988 FTOQ9C0B1 505 aaKnown RBP eCLIP15.53■□□□□ 0.082e-11■■■■□ 24.4
SNORD3B-1-201ENST00000577988 HNRNPCP07910 306 aaKnown RBP eCLIP10.44□□□□□ -0.742e-11■■■□□ 18.1
SNORD3B-1-201ENST00000577988 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.21□□□□□ -0.133e-11■■■■■ 35.5
SNORD3B-1-201ENST00000577988 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.88□□□□□ -0.192e-10■■■■■ 39.1
SNORD3B-1-201ENST00000577988 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.22■□□□□ 0.192e-10■■■■■ 59.1
SNORD3B-1-201ENST00000577988 NIP7Q9Y221 180 aaKnown RBP eCLIP17.86■□□□□ 0.456e-10■■□□□ 14.2
SNORD3B-1-201ENST00000577988 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.26□□□□□ -0.617e-10■■■□□ 17.6
SNORD3B-1-201ENST00000577988 BCCIPQ9P287 314 aaKnown RBP eCLIP14.24□□□□□ -0.131e-9■□□□□ 8.7
SNORD3B-1-201ENST00000577988 RBM15Q96T37 977 aaKnown RBP eCLIP13.95□□□□□ -0.184e-9■■■□□ 16.5
SNORD3B-1-201ENST00000577988 HNRNPKP61978 463 aaKnown RBP eCLIP13.87□□□□□ -0.192e-8■■■■■ 28.8
SNORD3B-1-201ENST00000577988 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.48□□□□□ -0.092e-8■■■■■ 85.7
SNORD3B-1-201ENST00000577988 RBM5P52756 815 aaKnown RBP eCLIP16.99■□□□□ 0.312e-8■■■■■ 30
SNORD3B-1-201ENST00000577988 PTBP1P26599 531 aaKnown RBP eCLIP10.99□□□□□ -0.653e-8■■□□□ 12.2
SNORD3B-1-201ENST00000577988 SSBP05455 408 aaKnown RBP eCLIP15.38■□□□□ 0.056e-8■■■■□ 24
SNORD3B-1-201ENST00000577988 ZC3H11AO75152 810 aaKnown RBP eCLIP15.16■□□□□ 0.029e-8■■■■■ 32.1
SNORD3B-1-201ENST00000577988 EIF3DO15371 548 aaKnown RBP eCLIP15.2■□□□□ 0.021e-7■■■■■ 32
SNORD3B-1-201ENST00000577988 ZNF622Q969S3 477 aaKnown RBP eCLIP17.68■□□□□ 0.421e-7■■■■■ 32.4
SNORD3B-1-201ENST00000577988 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.07■□□□□ 01e-7■■■■■ 37.6
SNORD3B-1-201ENST00000577988 PPIGQ13427 754 aaKnown RBP eCLIP15.63■□□□□ 0.092e-7■■■□□ 16.3
SNORD3B-1-201ENST00000577988 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.83□□□□□ -0.042e-7■■■■□ 26
SNORD3B-1-201ENST00000577988 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.74■□□□□ 0.272e-7■■■■■ 33.3
SNORD3B-1-201ENST00000577988 HNRNPMP52272 730 aaKnown RBP eCLIP21.56■■□□□ 1.042e-7■■■■□ 25.4
SNORD3B-1-201ENST00000577988 SRSF7Q16629 238 aaKnown RBP eCLIP11.23□□□□□ -0.612e-7■■□□□ 12.8
SNORD3B-1-201ENST00000577988 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.74□□□□□ -0.535e-7■■■■■ 29.4
SNORD3B-1-201ENST00000577988 EIF4G2P78344 907 aaKnown RBP eCLIP19.49■□□□□ 0.712e-6■■■■■ 29.6
SNORD3B-1-201ENST00000577988 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.89□□□□□ -0.513e-6■■■■■ 68
SNORD3B-1-201ENST00000577988 LSM11P83369 360 aaKnown RBP eCLIP12.22□□□□□ -0.453e-6■■■■□ 22.3
SNORD3B-1-201ENST00000577988 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.9□□□□□ -0.344e-6■■■■□ 20.4
SNORD3B-1-201ENST00000577988 HLTFQ14527 1009 aaKnown RBP eCLIP13.68□□□□□ -0.226e-6■■■■□ 22
SNORD3B-1-201ENST00000577988 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.18□□□□□ -0.38e-6■■■■■ 36.8
Retrieved 82 of 82 RNA–protein pairs in 50.9 ms