RNA: ENST00000570403.1

TRAP1-203, Transcript of TNF receptor associated protein 1, humanhuman

TSL 4

Gene TRAP1, Length 521 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-203ENST00000570403 DDX3XO00571 662 aaKnown RBP eCLIP23.2■■□□□ 1.38e-20■■■■□ 25.1
TRAP1-203ENST00000570403 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.29■■□□□ 17e-14■■■■■ 54.9
TRAP1-203ENST00000570403 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.95■■□□□ 1.97e-13■□□□□ 8.8
TRAP1-203ENST00000570403 RBM15Q96T37 977 aaKnown RBP eCLIP22.67■■□□□ 1.223e-12■■■□□ 16
TRAP1-203ENST00000570403 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.99■■□□□ 1.914e-11■□□□□ 9.9
TRAP1-203ENST00000570403 SF3B4Q15427 424 aaKnown RBP eCLIP20.57■□□□□ 0.886e-11■■□□□ 14.4
TRAP1-203ENST00000570403 RBFOX2O43251 390 aaKnown RBP eCLIP17.49■□□□□ 0.398e-11■■■□□ 18.2
TRAP1-203ENST00000570403 PRPF4O43172 522 aaKnown RBP eCLIP21.55■■□□□ 1.043e-10■■□□□ 14.5
TRAP1-203ENST00000570403 RPS3P23396 243 aaKnown RBP eCLIP21.97■■□□□ 1.114e-10■■■□□ 15.2
TRAP1-203ENST00000570403 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.13■■□□□ 1.454e-9■■■■■ 33.1
TRAP1-203ENST00000570403 NCBP2P52298 156 aaKnown RBP eCLIP20.75■□□□□ 0.911e-8■■□□□ 13.5
TRAP1-203ENST00000570403 U2AF2P26368 475 aaKnown RBP eCLIP25.34■■□□□ 1.652e-8■□□□□ 10
TRAP1-203ENST00000570403 ILF3Q12906 894 aaKnown RBP eCLIP22.55■■□□□ 1.23e-8■■■■□ 19.6
TRAP1-203ENST00000570403 FXR2P51116 673 aaKnown RBP eCLIP25.25■■□□□ 1.633e-8■■■■□ 22.1
TRAP1-203ENST00000570403 EFTUD2Q15029 972 aaKnown RBP eCLIP21.49■■□□□ 1.034e-8■■■□□ 16.4
TRAP1-203ENST00000570403 RBM5P52756 815 aaKnown RBP eCLIP28.17■■■□□ 2.14e-8■■□□□ 12.9
TRAP1-203ENST00000570403 NONOQ15233 471 aaKnown RBP eCLIP25.68■■□□□ 1.76e-8■■■■■ 28.9
TRAP1-203ENST00000570403 SMNDC1O75940 238 aaKnown RBP eCLIP20.34■□□□□ 0.858e-8■□□□□ 11
TRAP1-203ENST00000570403 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP21.25■□□□□ 0.998e-8■□□□□ 8.4
TRAP1-203ENST00000570403 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.89■□□□□ 0.451e-7■■■■■ 28.4
TRAP1-203ENST00000570403 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37■■■■□ 3.512e-7■■■■□ 22
TRAP1-203ENST00000570403 WRNQ14191 1432 aaPredicted RBP eCLIP40.1■■■■■ 4.013e-7■■■■□ 25.1
TRAP1-203ENST00000570403 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.89■■■■□ 3.183e-7■□□□□ 9.3
TRAP1-203ENST00000570403 HNRNPMP52272 730 aaKnown RBP eCLIP35.98■■■■□ 3.354e-7■■■■■ 27
TRAP1-203ENST00000570403 G3BP1Q13283 466 aaKnown RBP eCLIP28.05■■■□□ 2.084e-7■■□□□ 12.4
TRAP1-203ENST00000570403 TARDBPQ13148 414 aaKnown RBP eCLIP22.68■■□□□ 1.225e-7■■□□□ 12.3
TRAP1-203ENST00000570403 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.83■□□□□ 0.935e-7■■■■■ 65.9
TRAP1-203ENST00000570403 SF3B1O75533 1304 aaKnown RBP eCLIP24.85■■□□□ 1.576e-7■■■■■ 104.6
TRAP1-203ENST00000570403 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.74■■□□□ 1.878e-7■■□□□ 13.7
TRAP1-203ENST00000570403 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.59■■□□□ 1.699e-7■■■□□ 16.1
TRAP1-203ENST00000570403 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.51■□□□□ 0.711e-6■□□□□ 11.2
TRAP1-203ENST00000570403 FMR1Q06787 632 aaKnown RBP eCLIP28.6■■■□□ 2.171e-6■■■■□ 23.2
TRAP1-203ENST00000570403 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.14■■□□□ 1.291e-6■■□□□ 14.2
TRAP1-203ENST00000570403 PPIGQ13427 754 aaKnown RBP eCLIP26.09■■□□□ 1.771e-6■■■■□ 19.7
TRAP1-203ENST00000570403 SFPQP23246 707 aaKnown RBP eCLIP25.31■■□□□ 1.641e-6■■■■■ 34.7
TRAP1-203ENST00000570403 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.55■■□□□ 1.362e-6■□□□□ 9.5
TRAP1-203ENST00000570403 HNRNPCP07910 306 aaKnown RBP eCLIP16.74■□□□□ 0.272e-6■■■□□ 15.9
TRAP1-203ENST00000570403 PCBP2Q15366 365 aaKnown RBP eCLIP21.27■■□□□ 12e-6■□□□□ 10.9
TRAP1-203ENST00000570403 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.6■■■□□ 2.013e-6■□□□□ 9.3
TRAP1-203ENST00000570403 AQRO60306 1485 aaKnown RBP eCLIP40.38■■■■■ 4.054e-6■■■■□ 20.4
TRAP1-203ENST00000570403 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.89■■□□□ 1.414e-6■□□□□ 9
TRAP1-203ENST00000570403 KHSRPQ92945 711 aaKnown RBP eCLIP24.98■■□□□ 1.595e-6■□□□□ 9.4
TRAP1-203ENST00000570403 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.12■□□□□ 0.975e-6■■□□□ 12.6
TRAP1-203ENST00000570403 DDX6P26196 483 aaKnown RBP eCLIP24.18■■□□□ 1.461e-5■■■□□ 17.8
Retrieved 44 of 44 RNA–protein pairs in 22.2 ms