RNA: ENST00000568865.2

CNN2-209, Transcript of calponin 2, humanhuman

TSL 5

Gene CNN2, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-209ENST00000568865 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.34■□□□□ 0.852e-9■■■■■ 66.8
CNN2-209ENST00000568865 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.75■□□□□ 0.752e-13■■■■■ 50.4
CNN2-209ENST00000568865 AKAP1Q92667 903 aaKnown RBP eCLIP16.67■□□□□ 0.262e-8■■■■■ 48.9
CNN2-209ENST00000568865 ZRANB2O95218 330 aaKnown RBP eCLIP19.27■□□□□ 0.684e-7■■■■■ 40.3
CNN2-209ENST00000568865 UPF1Q92900 1129 aaKnown RBP eCLIP26.1■■□□□ 1.775e-29■■■■■ 38.9
CNN2-209ENST00000568865 SF3B4Q15427 424 aaKnown RBP eCLIP17.22■□□□□ 0.352e-6■■■■■ 34.5
CNN2-209ENST00000568865 GTF2F1P35269 517 aaKnown RBP eCLIP20.78■□□□□ 0.921e-6■■■■■ 31.2
CNN2-209ENST00000568865 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.44■□□□□ 0.866e-8■■■■■ 30.8
CNN2-209ENST00000568865 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.82■□□□□ 0.762e-7■■■■■ 29
CNN2-209ENST00000568865 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.52■□□□□ 0.725e-8■■■■□ 26.5
CNN2-209ENST00000568865 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.77■□□□□ 0.449e-8■■■■□ 26
CNN2-209ENST00000568865 FUSP35637 526 aaKnown RBP eCLIP12.7□□□□□ -0.381e-8■■■■□ 25.7
CNN2-209ENST00000568865 PRPF4O43172 522 aaKnown RBP eCLIP18.13■□□□□ 0.491e-6■■■■□ 23.9
CNN2-209ENST00000568865 SMNDC1O75940 238 aaKnown RBP eCLIP17.06■□□□□ 0.322e-6■■■■□ 23.8
CNN2-209ENST00000568865 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.78■□□□□ 0.768e-6■■■■□ 23.6
CNN2-209ENST00000568865 PCBP2Q15366 365 aaKnown RBP eCLIP18.08■□□□□ 0.492e-6■■■■□ 21.3
CNN2-209ENST00000568865 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.15■□□□□ 0.182e-9■■■■□ 19.8
CNN2-209ENST00000568865 AQRO60306 1485 aaKnown RBP eCLIP33.16■■■□□ 2.91e-6■■■■□ 19.7
CNN2-209ENST00000568865 EWSR1Q01844 656 aaKnown RBP eCLIP14.12□□□□□ -0.153e-9■■■■□ 19.7
CNN2-209ENST00000568865 TIAL1Q01085 375 aaKnown RBP eCLIP18.45■□□□□ 0.543e-10■■■■□ 19.5
CNN2-209ENST00000568865 EIF4G2P78344 907 aaKnown RBP eCLIP26.7■■□□□ 1.876e-8■■■□□ 18.5
CNN2-209ENST00000568865 TAF15Q92804 592 aaKnown RBP eCLIP15.47■□□□□ 0.072e-8■■■□□ 17
CNN2-209ENST00000568865 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.93■□□□□ 0.622e-9■■■□□ 16.3
CNN2-209ENST00000568865 TARDBPQ13148 414 aaKnown RBP eCLIP18.75■□□□□ 0.592e-6■■■□□ 14.8
CNN2-209ENST00000568865 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.28■■□□□ 12e-7■■■□□ 14.8
CNN2-209ENST00000568865 GPKOWQ92917 476 aaPredicted RBP eCLIP22.03■■□□□ 1.129e-6■■□□□ 14.5
CNN2-209ENST00000568865 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.99■□□□□ 0.631e-10■■□□□ 14.2
CNN2-209ENST00000568865 YBX3P16989 372 aaKnown RBP eCLIP24.57■■□□□ 1.526e-7■■□□□ 13.8
CNN2-209ENST00000568865 TIA1P31483 386 aaKnown RBP eCLIP17.79■□□□□ 0.442e-12■■□□□ 13.8
CNN2-209ENST00000568865 PABPC4Q13310 644 aaKnown RBP eCLIP22.68■■□□□ 1.221e-8■■□□□ 12.1
CNN2-209ENST00000568865 METAP2P50579 478 aaKnown RBP eCLIP22.08■■□□□ 1.134e-6■■□□□ 12.1
CNN2-209ENST00000568865 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.11■■□□□ 1.291e-6■■□□□ 11.9
CNN2-209ENST00000568865 HNRNPUQ00839 825 aaKnown RBP eCLIP24.48■■□□□ 1.515e-9■■□□□ 11.7
CNN2-209ENST00000568865 EFTUD2Q15029 972 aaKnown RBP eCLIP18.42■□□□□ 0.542e-6■■□□□ 11.4
CNN2-209ENST00000568865 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.21■■■□□ 2.271e-6■□□□□ 11.1
CNN2-209ENST00000568865 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.08■■□□□ 1.292e-15■□□□□ 11.1
CNN2-209ENST00000568865 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.15■□□□□ 0.186e-7■□□□□ 11
CNN2-209ENST00000568865 IGF2BP3O00425 579 aaKnown RBP eCLIP22.9■■□□□ 1.264e-6■□□□□ 10.8
CNN2-209ENST00000568865 FXR2P51116 673 aaKnown RBP eCLIP21.34■■□□□ 1.013e-8■□□□□ 10.2
CNN2-209ENST00000568865 RPS3P23396 243 aaKnown RBP eCLIP18.62■□□□□ 0.578e-9■□□□□ 10.1
CNN2-209ENST00000568865 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.49■■□□□ 1.033e-6■□□□□ 10.1
CNN2-209ENST00000568865 FTOQ9C0B1 505 aaKnown RBP eCLIP21.44■■□□□ 1.022e-6■□□□□ 10
CNN2-209ENST00000568865 WDR43Q15061 677 aaKnown RBP eCLIP25.33■■□□□ 1.645e-7■□□□□ 9.9
CNN2-209ENST00000568865 ILF3Q12906 894 aaKnown RBP eCLIP18.9■□□□□ 0.626e-7■□□□□ 9.4
CNN2-209ENST00000568865 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.56■■■□□ 2.482e-6■□□□□ 8.3
CNN2-209ENST00000568865 PPIGQ13427 754 aaKnown RBP eCLIP21.54■■□□□ 1.045e-7■□□□□ 8.2
CNN2-209ENST00000568865 SUB1P53999 127 aaKnown RBP eCLIP14.52□□□□□ -0.081e-10■□□□□ 8.1
Retrieved 47 of 47 RNA–protein pairs in 42 ms