RNA: ENST00000563623.5
ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, human
Retrieved 7 of 7 RNA–protein pairs in 16.4 ms
ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, human
TSL 1 (best)
Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .
RNA | Protein | Prediction (catRAPID) | Interaction (ENCODE eCLIP) | ||||||
---|---|---|---|---|---|---|---|---|---|
Transcript Symbol | Ensembl Transcript ID | Gene | UniProt Accession | Length | Protein Status | Prediction Score | Prediction z-Score | p-Value | Fold Change |
ABCA3-203 | ENST00000563623 | SF3B1 | O75533 | 1304 aa | Known RBP eCLIP | 12.08 | □□□□□ -0.48 | 2e-6 | ■■■■■ 136.5 |
ABCA3-203 | ENST00000563623 | DDX3X | O00571 | 662 aa | Known RBP eCLIP | 12.82 | □□□□□ -0.36 | 1e-12 | ■■■■■ 56.7 |
ABCA3-203 | ENST00000563623 | UTP3 | Q9NQZ2 | 479 aa | Known RBP eCLIP | 12.91 | □□□□□ -0.34 | 3e-6 | ■■■■■ 56.1 |
ABCA3-203 | ENST00000563623 | AQR | O60306 | 1485 aa | Known RBP eCLIP | 16.14 | ■□□□□ 0.17 | 1e-6 | ■■■■□ 25.9 |
ABCA3-203 | ENST00000563623 | NONO | Q15233 | 471 aa | Known RBP eCLIP | 13.11 | □□□□□ -0.31 | 1e-7 | ■■■■□ 25.1 |
ABCA3-203 | ENST00000563623 | SLTM | Q9NWH9 | 1034 aa | Known RBP eCLIP | 12.62 | □□□□□ -0.39 | 3e-6 | ■■■■□ 23.8 |
ABCA3-203 | ENST00000563623 | BUD13 | Q9BRD0 | 619 aa | Known RBP eCLIP | 12.88 | □□□□□ -0.35 | 7e-6 | ■■□□□ 12.2 |