RNA: ENST00000563039.2

SPN-205, Transcript of sialophorin, humanhuman

TSL 5

Gene SPN, Length 1,853 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPN-205ENST00000563039 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.16■□□□□ 0.667e-21■■■■■ 165.1
SPN-205ENST00000563039 SF3B1O75533 1304 aaKnown RBP eCLIP20.5■□□□□ 0.872e-22■■■■■ 136.4
SPN-205ENST00000563039 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.42■□□□□ 0.72e-7■■■■■ 51.5
SPN-205ENST00000563039 AQRO60306 1485 aaKnown RBP eCLIP31.74■■■□□ 2.673e-7■■■■■ 36.6
SPN-205ENST00000563039 EIF3GO75821 320 aaKnown RBP eCLIP15.31■□□□□ 0.046e-6■■■■■ 27.3
SPN-205ENST00000563039 AGGF1Q8N302 714 aaeCLIP19.68■□□□□ 0.743e-8■■■■□ 25.4
SPN-205ENST00000563039 DDX3XO00571 662 aaKnown RBP eCLIP20.7■□□□□ 0.93e-9■■■■□ 25.1
SPN-205ENST00000563039 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.79■□□□□ 0.923e-7■■■■□ 24.4
SPN-205ENST00000563039 TARDBPQ13148 414 aaKnown RBP eCLIP18.14■□□□□ 0.491e-12■■■■□ 22.6
SPN-205ENST00000563039 GTF2F1P35269 517 aaKnown RBP eCLIP21.39■■□□□ 1.011e-10■■■■□ 21.2
SPN-205ENST00000563039 SND1Q7KZF4 910 aaKnown RBP eCLIP20.24■□□□□ 0.833e-13■■■■□ 21.1
SPN-205ENST00000563039 UPF1Q92900 1129 aaKnown RBP eCLIP24.06■■□□□ 1.442e-8■■■■□ 20.6
SPN-205ENST00000563039 RBM15Q96T37 977 aaKnown RBP eCLIP19.82■□□□□ 0.761e-6■■■■□ 20.3
SPN-205ENST00000563039 RPS3P23396 243 aaKnown RBP eCLIP19.13■□□□□ 0.652e-6■■■■□ 19.6
SPN-205ENST00000563039 RPS11P62280 158 aaKnown RBP eCLIP17.1■□□□□ 0.333e-10■■■□□ 17.3
SPN-205ENST00000563039 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.38■■■□□ 2.291e-6■■■□□ 17.1
SPN-205ENST00000563039 KHSRPQ92945 711 aaKnown RBP eCLIP20.41■□□□□ 0.861e-9■■■□□ 16.6
SPN-205ENST00000563039 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.52■□□□□ 0.393e-13■■■□□ 16.6
SPN-205ENST00000563039 HNRNPKP61978 463 aaKnown RBP eCLIP18.74■□□□□ 0.595e-10■■■□□ 16.4
SPN-205ENST00000563039 WDR43Q15061 677 aaKnown RBP eCLIP25.89■■□□□ 1.742e-6■■■□□ 15.7
SPN-205ENST00000563039 AKAP1Q92667 903 aaKnown RBP eCLIP16.84■□□□□ 0.299e-7■■■□□ 15.6
SPN-205ENST00000563039 PABPC4Q13310 644 aaKnown RBP eCLIP22.06■■□□□ 1.122e-6■■■□□ 15
SPN-205ENST00000563039 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.53■■■□□ 2.323e-6■■■□□ 14.6
SPN-205ENST00000563039 TROVE2P10155 538 aaKnown RBP eCLIP19.26■□□□□ 0.671e-7■■□□□ 14.3
SPN-205ENST00000563039 YBX3P16989 372 aaKnown RBP eCLIP23.19■■□□□ 1.32e-7■■□□□ 14.2
SPN-205ENST00000563039 AARSP49588 968 aaKnown RBP eCLIP20.66■□□□□ 0.93e-8■■□□□ 13.7
SPN-205ENST00000563039 AATFQ9NY61 560 aaKnown RBP eCLIP23.19■■□□□ 1.33e-6■■□□□ 13.7
SPN-205ENST00000563039 DDX6P26196 483 aaKnown RBP eCLIP19.92■□□□□ 0.787e-8■■□□□ 13.4
SPN-205ENST00000563039 ILF3Q12906 894 aaKnown RBP eCLIP18.81■□□□□ 0.61e-8■■□□□ 13.4
SPN-205ENST00000563039 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.26■□□□□ 0.831e-12■■□□□ 13.3
SPN-205ENST00000563039 EIF4G2P78344 907 aaKnown RBP eCLIP27.39■■□□□ 1.982e-13■■□□□ 12.7
SPN-205ENST00000563039 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.91■■□□□ 1.268e-15■■□□□ 12.3
SPN-205ENST00000563039 ZC3H11AO75152 810 aaKnown RBP eCLIP20.81■□□□□ 0.924e-10■■□□□ 11.9
SPN-205ENST00000563039 PCBP1Q15365 356 aaKnown RBP eCLIP21.01■□□□□ 0.951e-7■■□□□ 11.6
SPN-205ENST00000563039 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.15■□□□□ 0.824e-13■■□□□ 11.4
SPN-205ENST00000563039 SUB1P53999 127 aaKnown RBP eCLIP15.26■□□□□ 0.036e-7■□□□□ 10.7
SPN-205ENST00000563039 METAP2P50579 478 aaKnown RBP eCLIP22.65■■□□□ 1.222e-6■□□□□ 10.3
SPN-205ENST00000563039 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.44■□□□□ 0.72e-6■□□□□ 10.2
SPN-205ENST00000563039 WRNQ14191 1432 aaPredicted RBP eCLIP32.7■■■□□ 2.821e-6■□□□□ 9.9
SPN-205ENST00000563039 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.77■■□□□ 1.081e-11■□□□□ 9.7
SPN-205ENST00000563039 FUSP35637 526 aaKnown RBP eCLIP12.58□□□□□ -0.45e-9■□□□□ 9.6
SPN-205ENST00000563039 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.2■□□□□ 0.821e-5■□□□□ 9.5
SPN-205ENST00000563039 CPSF6Q16630 551 aaKnown RBP eCLIP18.69■□□□□ 0.588e-6■□□□□ 9.2
SPN-205ENST00000563039 XRCC6P12956 609 aaKnown RBP eCLIP22.57■■□□□ 1.22e-9■□□□□ 9.2
SPN-205ENST00000563039 DDX21Q9NR30 783 aaKnown RBP eCLIP24.67■■□□□ 1.545e-8■□□□□ 9
SPN-205ENST00000563039 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.19■□□□□ 0.827e-10■□□□□ 8.9
SPN-205ENST00000563039 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.3■■□□□ 17e-8■□□□□ 8.9
SPN-205ENST00000563039 NONOQ15233 471 aaKnown RBP eCLIP22.11■■□□□ 1.132e-7■□□□□ 8.6
SPN-205ENST00000563039 NIPBLQ6KC79 2804 aaeCLIP15.33■□□□□ 0.045e-8■□□□□ 8.6
SPN-205ENST00000563039 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.83■□□□□ 0.442e-6■□□□□ 8.1
Retrieved 50 of 50 RNA–protein pairs in 76.2 ms