RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-208ENST00000557702 SF3B1O75533 1304 aaKnown RBP eCLIP10.55□□□□□ -0.724e-7■■■■■ 86.2
PABPN1-208ENST00000557702 EFTUD2Q15029 972 aaKnown RBP eCLIP8.49□□□□□ -1.055e-7■■■■■ 26.9
PABPN1-208ENST00000557702 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.29□□□□□ -0.61e-8■■■■□ 26.3
PABPN1-208ENST00000557702 AQRO60306 1485 aaKnown RBP eCLIP18.28■□□□□ 0.527e-8■■■■□ 24.9
PABPN1-208ENST00000557702 SF3B4Q15427 424 aaKnown RBP eCLIP8.69□□□□□ -1.025e-9■■■■□ 22.6
PABPN1-208ENST00000557702 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.83□□□□□ -11e-12■■■■□ 21
PABPN1-208ENST00000557702 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.78□□□□□ -0.522e-30■■■□□ 18.1
PABPN1-208ENST00000557702 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.11□□□□□ -0.953e-57■■■□□ 17.6
PABPN1-208ENST00000557702 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.7□□□□□ -1.025e-6■■■□□ 17.5
PABPN1-208ENST00000557702 PPIGQ13427 754 aaKnown RBP eCLIP11.75□□□□□ -0.532e-13■■■□□ 17.4
PABPN1-208ENST00000557702 GTF2F1P35269 517 aaKnown RBP eCLIP11.25□□□□□ -0.611e-16■■■□□ 17
PABPN1-208ENST00000557702 RBFOX2O43251 390 aaKnown RBP eCLIP6.42□□□□□ -1.385e-11■■■□□ 16.9
PABPN1-208ENST00000557702 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.54□□□□□ -1.048e-16■■■□□ 16.3
PABPN1-208ENST00000557702 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.87□□□□□ -1.152e-9■■■□□ 16
PABPN1-208ENST00000557702 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.98□□□□□ -0.811e-10■■■□□ 15
PABPN1-208ENST00000557702 ZRANB2O95218 330 aaKnown RBP eCLIP9.07□□□□□ -0.967e-9■■■□□ 14.9
PABPN1-208ENST00000557702 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.15□□□□□ -0.624e-15■■■□□ 14.6
PABPN1-208ENST00000557702 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.31□□□□□ -0.922e-21■■□□□ 14.4
PABPN1-208ENST00000557702 PCBP1Q15365 356 aaKnown RBP eCLIP10.47□□□□□ -0.731e-6■■□□□ 14.3
PABPN1-208ENST00000557702 SF3A3Q12874 501 aaKnown RBP eCLIP7.46□□□□□ -1.221e-7■■□□□ 13.8
PABPN1-208ENST00000557702 U2AF1Q01081 240 aaKnown RBP eCLIP12.41□□□□□ -0.425e-12■■□□□ 13.8
PABPN1-208ENST00000557702 PABPC4Q13310 644 aaKnown RBP eCLIP11.94□□□□□ -0.53e-6■■□□□ 13.4
PABPN1-208ENST00000557702 CDC40O60508 579 aaKnown RBP eCLIP8.91□□□□□ -0.983e-6■■□□□ 13.2
PABPN1-208ENST00000557702 KHSRPQ92945 711 aaKnown RBP eCLIP11.74□□□□□ -0.531e-8■■□□□ 12.8
PABPN1-208ENST00000557702 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.29□□□□□ -0.284e-16■■□□□ 12.7
PABPN1-208ENST00000557702 U2AF2P26368 475 aaKnown RBP eCLIP10.32□□□□□ -0.763e-7■■□□□ 12.6
PABPN1-208ENST00000557702 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.81□□□□□ -0.686e-6■■□□□ 12.1
PABPN1-208ENST00000557702 RBM22Q9NW64 420 aaKnown RBP eCLIP8.98□□□□□ -0.971e-14■■□□□ 11.9
PABPN1-208ENST00000557702 ZNF622Q969S3 477 aaKnown RBP eCLIP13.21□□□□□ -0.292e-8■■□□□ 11.7
PABPN1-208ENST00000557702 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.23□□□□□ -0.933e-8■□□□□ 10.8
PABPN1-208ENST00000557702 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.14■□□□□ 0.011e-12■□□□□ 10.7
PABPN1-208ENST00000557702 GPKOWQ92917 476 aaPredicted RBP eCLIP10.94□□□□□ -0.663e-11■□□□□ 10.3
PABPN1-208ENST00000557702 PRPF4O43172 522 aaKnown RBP eCLIP8.87□□□□□ -0.991e-9■□□□□ 9.9
PABPN1-208ENST00000557702 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.75■□□□□ 0.113e-10■□□□□ 9.4
PABPN1-208ENST00000557702 RBM15Q96T37 977 aaKnown RBP eCLIP9.53□□□□□ -0.881e-11■□□□□ 9.2
PABPN1-208ENST00000557702 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.65□□□□□ -0.73e-8■□□□□ 9
PABPN1-208ENST00000557702 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.47□□□□□ -1.052e-11■□□□□ 8.8
PABPN1-208ENST00000557702 RBM5P52756 815 aaKnown RBP eCLIP12.24□□□□□ -0.451e-6■□□□□ 8
PABPN1-208ENST00000557702 SRSF7Q16629 238 aaKnown RBP eCLIP7.37□□□□□ -1.234e-7■□□□□ 8
Retrieved 39 of 39 RNA–protein pairs in 20.9 ms