RNA: ENST00000555659.5

CKB-213, Transcript of creatine kinase B, humanhuman

TSL 2

Gene CKB, Length 755 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKB-213ENST00000555659 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.53■□□□□ 0.564e-12■■■■■ 139.7
CKB-213ENST00000555659 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.45■■□□□ 1.343e-19■■■■■ 108.1
CKB-213ENST00000555659 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.63■□□□□ 0.411e-6■■■■■ 92.8
CKB-213ENST00000555659 AATFQ9NY61 560 aaKnown RBP eCLIP23.21■■□□□ 1.312e-21■■■■■ 73.9
CKB-213ENST00000555659 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.81■□□□□ 0.767e-8■■■■■ 73.4
CKB-213ENST00000555659 NIPBLQ6KC79 2804 aaeCLIP17.82■□□□□ 0.441e-12■■■■■ 72.1
CKB-213ENST00000555659 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.93■□□□□ 0.781e-6■■■■■ 72.1
CKB-213ENST00000555659 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.22■□□□□ 0.352e-23■■■■■ 66.4
CKB-213ENST00000555659 GPKOWQ92917 476 aaPredicted RBP eCLIP21.98■■□□□ 1.111e-8■■■■■ 65.4
CKB-213ENST00000555659 PCBP1Q15365 356 aaKnown RBP eCLIP20.93■□□□□ 0.942e-8■■■■■ 57.1
CKB-213ENST00000555659 WRNQ14191 1432 aaPredicted RBP eCLIP34.26■■■■□ 3.077e-7■■■■■ 52.5
CKB-213ENST00000555659 SF3B1O75533 1304 aaKnown RBP eCLIP20.9■□□□□ 0.943e-6■■■■■ 51.7
CKB-213ENST00000555659 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.08■□□□□ 0.323e-8■■■■■ 50.5
CKB-213ENST00000555659 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.93■□□□□ 0.463e-6■■■■■ 50.5
CKB-213ENST00000555659 NKRFO15226 690 aaKnown RBP eCLIP22.21■■□□□ 1.152e-8■■■■■ 32.4
CKB-213ENST00000555659 DKC1O60832 514 aaKnown RBP eCLIP20.93■□□□□ 0.942e-7■■■■■ 31.2
CKB-213ENST00000555659 TROVE2P10155 538 aaKnown RBP eCLIP16.3■□□□□ 0.29e-7■■■■■ 31
CKB-213ENST00000555659 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.59■■□□□ 1.212e-13■■■■■ 30.7
CKB-213ENST00000555659 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.65■□□□□ 0.742e-6■■■■■ 30.5
CKB-213ENST00000555659 AQRO60306 1485 aaKnown RBP eCLIP35.39■■■■□ 3.263e-7■■■■■ 29.3
CKB-213ENST00000555659 XRCC6P12956 609 aaKnown RBP eCLIP20.8■□□□□ 0.921e-6■■■■□ 25.8
CKB-213ENST00000555659 DDX3XO00571 662 aaKnown RBP eCLIP19.1■□□□□ 0.652e-20■■■■□ 25.1
CKB-213ENST00000555659 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.91■■■□□ 2.71e-11■■■■□ 22.7
CKB-213ENST00000555659 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.6■■□□□ 1.213e-7■■■■□ 22.2
CKB-213ENST00000555659 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.73■■□□□ 1.231e-7■■■■□ 21
CKB-213ENST00000555659 RPS3P23396 243 aaKnown RBP eCLIP18.07■□□□□ 0.481e-9■■■■□ 19.8
CKB-213ENST00000555659 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.81■□□□□ 0.287e-7■■■□□ 18.1
CKB-213ENST00000555659 SUB1P53999 127 aaKnown RBP eCLIP13.83□□□□□ -0.29e-7■■■□□ 17.7
CKB-213ENST00000555659 EFTUD2Q15029 972 aaKnown RBP eCLIP17.66■□□□□ 0.424e-7■■■□□ 17.1
CKB-213ENST00000555659 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.38■■□□□ 1.335e-7■■■□□ 16
CKB-213ENST00000555659 YBX3P16989 372 aaKnown RBP eCLIP26.74■■□□□ 1.874e-9■■■□□ 15.9
CKB-213ENST00000555659 PPIGQ13427 754 aaKnown RBP eCLIP22.63■■□□□ 1.219e-8■■■□□ 15.9
CKB-213ENST00000555659 PUM1Q14671 1186 aaKnown RBP eCLIP21.03■□□□□ 0.964e-7■■■□□ 14.8
CKB-213ENST00000555659 PRPF4O43172 522 aaKnown RBP eCLIP17.78■□□□□ 0.444e-7■■□□□ 13.5
CKB-213ENST00000555659 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.9■□□□□ 0.462e-9■■□□□ 12.5
CKB-213ENST00000555659 RBFOX2O43251 390 aaKnown RBP eCLIP14.25□□□□□ -0.135e-6■□□□□ 10.9
CKB-213ENST00000555659 METAP2P50579 478 aaKnown RBP eCLIP21.47■■□□□ 1.036e-9■□□□□ 10.6
CKB-213ENST00000555659 KHSRPQ92945 711 aaKnown RBP eCLIP22.33■■□□□ 1.174e-7■□□□□ 10.4
CKB-213ENST00000555659 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.87■□□□□ 0.612e-7■□□□□ 8.4
CKB-213ENST00000555659 TIA1P31483 386 aaKnown RBP eCLIP17.17■□□□□ 0.341e-7■□□□□ 8.4
Retrieved 40 of 40 RNA–protein pairs in 365.4 ms