RNA: ENST00000553829.1

LINC01578-201, Transcript of long intergenic non-protein coding RNA 1578, humanhuman

TSL 2 BASIC

Gene LINC01578, Length 732 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01578-201ENST00000553829 UPF1Q92900 1129 aaKnown RBP eCLIP40.64■■■■■ 4.12e-7■■■■■ 44.5
LINC01578-201ENST00000553829 TIA1P31483 386 aaKnown RBP eCLIP26.82■■□□□ 1.886e-7■■■■■ 35.8
LINC01578-201ENST00000553829 AQRO60306 1485 aaKnown RBP eCLIP51.02■■■■■ 5.762e-20■■■■■ 27.6
LINC01578-201ENST00000553829 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP31.28■■■□□ 2.69e-8■■■■■ 27
LINC01578-201ENST00000553829 SF3B1O75533 1304 aaKnown RBP eCLIP31.66■■■□□ 2.664e-6■■■■□ 26.1
LINC01578-201ENST00000553829 PRPF4O43172 522 aaKnown RBP eCLIP27.57■■■□□ 23e-9■■■■□ 25.4
LINC01578-201ENST00000553829 CSTF2P33240 577 aaKnown RBP eCLIP28.39■■■□□ 2.143e-17■■■■□ 25
LINC01578-201ENST00000553829 XRN2Q9H0D6 950 aaKnown RBP eCLIP34.18■■■■□ 3.067e-15■■■■□ 24.3
LINC01578-201ENST00000553829 NONOQ15233 471 aaKnown RBP eCLIP32.88■■■□□ 2.853e-10■■■■□ 20
LINC01578-201ENST00000553829 EFTUD2Q15029 972 aaKnown RBP eCLIP27.56■■■□□ 23e-10■■■■□ 19.7
LINC01578-201ENST00000553829 DDX6P26196 483 aaKnown RBP eCLIP30.87■■■□□ 2.533e-7■■■□□ 16.7
LINC01578-201ENST00000553829 GTF2F1P35269 517 aaKnown RBP eCLIP31.92■■■□□ 2.73e-16■■■□□ 16.3
LINC01578-201ENST00000553829 AARSP49588 968 aaKnown RBP eCLIP31.43■■■□□ 2.621e-8■■■□□ 15.5
LINC01578-201ENST00000553829 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP46.74■■■■■ 5.076e-10■■■□□ 15.4
LINC01578-201ENST00000553829 DDX3XO00571 662 aaKnown RBP eCLIP29.8■■■□□ 2.362e-7■■■□□ 14.8
LINC01578-201ENST00000553829 SRSF9Q13242 221 aaKnown RBP eCLIP17.92■□□□□ 0.466e-8■■□□□ 14.3
LINC01578-201ENST00000553829 EWSR1Q01844 656 aaKnown RBP eCLIP21.16■□□□□ 0.983e-13■■□□□ 14
LINC01578-201ENST00000553829 DHX30Q7L2E3 1194 aaKnown RBP eCLIP34.06■■■■□ 3.042e-8■■□□□ 14
LINC01578-201ENST00000553829 XPO5Q9HAV4 1204 aaKnown RBP eCLIP35.17■■■■□ 3.223e-10■■□□□ 13.9
LINC01578-201ENST00000553829 AKAP1Q92667 903 aaKnown RBP eCLIP25.46■■□□□ 1.673e-7■■□□□ 13.7
LINC01578-201ENST00000553829 NCBP2P52298 156 aaKnown RBP eCLIP26.63■■□□□ 1.855e-11■■□□□ 13.5
LINC01578-201ENST00000553829 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP27.23■■□□□ 1.951e-6■■□□□ 13.1
LINC01578-201ENST00000553829 AATFQ9NY61 560 aaKnown RBP eCLIP35.32■■■■□ 3.244e-10■■□□□ 12.9
LINC01578-201ENST00000553829 U2AF1Q01081 240 aaKnown RBP eCLIP38.8■■■■□ 3.85e-14■■□□□ 12.7
LINC01578-201ENST00000553829 FMR1Q06787 632 aaKnown RBP eCLIP36.2■■■■□ 3.392e-9■■□□□ 12
LINC01578-201ENST00000553829 CDC40O60508 579 aaKnown RBP eCLIP26.65■■□□□ 1.866e-7■■□□□ 11.9
LINC01578-201ENST00000553829 FUSP35637 526 aaKnown RBP eCLIP19.32■□□□□ 0.682e-6■■□□□ 11.8
LINC01578-201ENST00000553829 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP28.18■■■□□ 2.16e-9■■□□□ 11.8
LINC01578-201ENST00000553829 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP44.47■■■■■ 4.714e-8■■□□□ 11.6
LINC01578-201ENST00000553829 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP27.12■■□□□ 1.938e-11■■□□□ 11.5
LINC01578-201ENST00000553829 PHF6Q8IWS0 365 aaKnown RBP eCLIP32.28■■■□□ 2.761e-6■■□□□ 11.5
LINC01578-201ENST00000553829 TIAL1Q01085 375 aaKnown RBP eCLIP27.92■■■□□ 2.065e-6■■□□□ 11.4
LINC01578-201ENST00000553829 SRSF1Q07955 248 aaKnown RBP eCLIP27.06■■□□□ 1.922e-7■□□□□ 11.3
LINC01578-201ENST00000553829 U2AF2P26368 475 aaKnown RBP eCLIP32.53■■■□□ 2.82e-7■□□□□ 10.4
LINC01578-201ENST00000553829 DDX52Q9Y2R4 599 aaKnown RBP eCLIP34.47■■■■□ 3.112e-17■□□□□ 10.4
LINC01578-201ENST00000553829 SND1Q7KZF4 910 aaKnown RBP eCLIP29.98■■■□□ 2.395e-8■□□□□ 10
LINC01578-201ENST00000553829 METAP2P50579 478 aaKnown RBP eCLIP33.4■■■□□ 2.943e-7■□□□□ 8.8
LINC01578-201ENST00000553829 RBM22Q9NW64 420 aaKnown RBP eCLIP29.17■■■□□ 2.263e-6■□□□□ 8.8
LINC01578-201ENST00000553829 XRCC6P12956 609 aaKnown RBP eCLIP32.39■■■□□ 2.786e-7■□□□□ 8.7
LINC01578-201ENST00000553829 GPKOWQ92917 476 aaPredicted RBP eCLIP33.37■■■□□ 2.938e-11■□□□□ 8.7
LINC01578-201ENST00000553829 DDX51Q8N8A6 666 aaKnown RBP eCLIP30.06■■■□□ 2.44e-16■□□□□ 8.7
LINC01578-201ENST00000553829 RBM15Q96T37 977 aaKnown RBP eCLIP28.99■■■□□ 2.234e-6■□□□□ 8.6
LINC01578-201ENST00000553829 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP24.75■■□□□ 1.557e-12■□□□□ 8.1
Retrieved 43 of 43 RNA–protein pairs in 28.9 ms