RNA: ENST00000551301.1

SLC48A1-208, Transcript of solute carrier family 48 member 1, humanhuman

TSL 2

Gene SLC48A1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-208ENST00000551301 SF3B1O75533 1304 aaKnown RBP eCLIP22.34■■□□□ 1.171e-19■■■■■ 448
SLC48A1-208ENST00000551301 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.06■□□□□ 0.642e-6■■■■■ 102.3
SLC48A1-208ENST00000551301 AARSP49588 968 aaKnown RBP eCLIP22■■□□□ 1.111e-7■■■■■ 69.8
SLC48A1-208ENST00000551301 DDX3XO00571 662 aaKnown RBP eCLIP20.54■□□□□ 0.882e-6■■■■■ 31.8
SLC48A1-208ENST00000551301 EWSR1Q01844 656 aaKnown RBP eCLIP14.89□□□□□ -0.035e-7■■■■□ 25.4
SLC48A1-208ENST00000551301 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.08■■□□□ 1.291e-6■■■■□ 24.4
SLC48A1-208ENST00000551301 AGGF1Q8N302 714 aaeCLIP19.35■□□□□ 0.695e-8■■■■□ 19.9
SLC48A1-208ENST00000551301 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.75■□□□□ 0.273e-6■■■□□ 17.7
SLC48A1-208ENST00000551301 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.02■■■□□ 2.886e-9■■■□□ 15.3
SLC48A1-208ENST00000551301 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.05■□□□□ 0.641e-8■■□□□ 13.3
SLC48A1-208ENST00000551301 YBX3P16989 372 aaKnown RBP eCLIP27.14■■□□□ 1.942e-7■■□□□ 13.2
SLC48A1-208ENST00000551301 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.2■□□□□ 0.663e-6■■□□□ 12.8
SLC48A1-208ENST00000551301 NONOQ15233 471 aaKnown RBP eCLIP22.94■■□□□ 1.266e-6■■□□□ 11.8
SLC48A1-208ENST00000551301 FTOQ9C0B1 505 aaKnown RBP eCLIP23.39■■□□□ 1.332e-6■■□□□ 11.5
SLC48A1-208ENST00000551301 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.47■□□□□ 0.558e-6■□□□□ 10.5
Retrieved 15 of 15 RNA–protein pairs in 200.6 ms