RNA: ENST00000550851.5

LGR5-206, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 2

Gene LGR5, Length 4,095 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-206ENST00000550851 WRNQ14191 1432 aaPredicted RBP eCLIP16.67■□□□□ 0.262e-10■■■■■ 91.9
LGR5-206ENST00000550851 EFTUD2Q15029 972 aaKnown RBP eCLIP12□□□□□ -0.493e-6■■■■■ 41.9
LGR5-206ENST00000550851 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.19□□□□□ -0.462e-10■■■■■ 34
LGR5-206ENST00000550851 TIA1P31483 386 aaKnown RBP eCLIP11.24□□□□□ -0.611e-10■■■■■ 30
LGR5-206ENST00000550851 HNRNPKP61978 463 aaKnown RBP eCLIP11.11□□□□□ -0.632e-8■■■■■ 28.6
LGR5-206ENST00000550851 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.27□□□□□ -0.457e-7■■■■■ 27.2
LGR5-206ENST00000550851 ZC3H11AO75152 810 aaKnown RBP eCLIP12.23□□□□□ -0.453e-9■■■■□ 26.2
LGR5-206ENST00000550851 FUBP3Q96I24 572 aaKnown RBP eCLIP11.72□□□□□ -0.539e-7■■■■□ 25.6
LGR5-206ENST00000550851 PTBP1P26599 531 aaKnown RBP eCLIP10.39□□□□□ -0.752e-8■■■■□ 25.2
LGR5-206ENST00000550851 TAF15Q92804 592 aaKnown RBP eCLIP9.83□□□□□ -0.847e-7■■■■□ 23.1
LGR5-206ENST00000550851 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.32□□□□□ -0.766e-7■■■■□ 23
LGR5-206ENST00000550851 RBFOX2O43251 390 aaKnown RBP eCLIP9.61□□□□□ -0.879e-8■■■■□ 22.1
LGR5-206ENST00000550851 HNRNPUQ00839 825 aaKnown RBP eCLIP16.06■□□□□ 0.161e-6■■■■□ 21.8
LGR5-206ENST00000550851 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.16□□□□□ -0.463e-7■■■■□ 21.7
LGR5-206ENST00000550851 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.12■□□□□ 0.012e-6■■■■□ 20.9
LGR5-206ENST00000550851 RPS3P23396 243 aaKnown RBP eCLIP11.21□□□□□ -0.619e-7■■■■□ 20.8
LGR5-206ENST00000550851 TIAL1Q01085 375 aaKnown RBP eCLIP10.85□□□□□ -0.672e-8■■■■□ 20.6
LGR5-206ENST00000550851 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.15□□□□□ -0.32e-7■■■□□ 18.9
LGR5-206ENST00000550851 SND1Q7KZF4 910 aaKnown RBP eCLIP12.78□□□□□ -0.361e-6■■■□□ 17.8
LGR5-206ENST00000550851 UPF1Q92900 1129 aaKnown RBP eCLIP12.01□□□□□ -0.493e-7■■■□□ 17.1
LGR5-206ENST00000550851 GTF2F1P35269 517 aaKnown RBP eCLIP12.95□□□□□ -0.342e-8■■■□□ 17.1
LGR5-206ENST00000550851 QKIQ96PU8 341 aaKnown RBP eCLIP11.78□□□□□ -0.527e-8■■■□□ 16.9
LGR5-206ENST00000550851 RBM5P52756 815 aaKnown RBP eCLIP13.81□□□□□ -0.23e-8■■■□□ 16.9
LGR5-206ENST00000550851 U2AF2P26368 475 aaKnown RBP eCLIP12.94□□□□□ -0.341e-6■■■□□ 16.6
LGR5-206ENST00000550851 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.93□□□□□ -0.665e-13■■■□□ 16.5
LGR5-206ENST00000550851 CSTF2P33240 577 aaKnown RBP eCLIP11.13□□□□□ -0.635e-11■■■□□ 15.9
LGR5-206ENST00000550851 HNRNPLP14866 589 aaKnown RBP eCLIP11.8□□□□□ -0.527e-8■■■□□ 15.1
LGR5-206ENST00000550851 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.98□□□□□ -0.654e-6■■□□□ 13.3
LGR5-206ENST00000550851 EIF3HO15372 352 aaKnown RBP eCLIP12.15□□□□□ -0.473e-7■■□□□ 13.2
LGR5-206ENST00000550851 PPIGQ13427 754 aaKnown RBP eCLIP11.64□□□□□ -0.556e-7■■□□□ 13.2
LGR5-206ENST00000550851 PCBP1Q15365 356 aaKnown RBP eCLIP11.94□□□□□ -0.59e-7■■□□□ 12.5
LGR5-206ENST00000550851 RBM15Q96T37 977 aaKnown RBP eCLIP12.3□□□□□ -0.442e-6■■□□□ 11.8
LGR5-206ENST00000550851 MATR3P43243 847 aaKnown RBP eCLIP13.34□□□□□ -0.274e-7■■□□□ 11.4
LGR5-206ENST00000550851 U2AF1Q01081 240 aaKnown RBP eCLIP15.2■□□□□ 0.021e-6■□□□□ 11.1
LGR5-206ENST00000550851 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.49□□□□□ -0.254e-7■□□□□ 11
LGR5-206ENST00000550851 DDX3XO00571 662 aaKnown RBP eCLIP12.29□□□□□ -0.442e-21■□□□□ 10.4
LGR5-206ENST00000550851 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.32■□□□□ 0.29e-7■□□□□ 10.3
LGR5-206ENST00000550851 NCBP2P52298 156 aaKnown RBP eCLIP11.33□□□□□ -0.65e-9■□□□□ 10
LGR5-206ENST00000550851 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.6□□□□□ -0.557e-6■□□□□ 9
LGR5-206ENST00000550851 PCBP2Q15366 365 aaKnown RBP eCLIP11.39□□□□□ -0.592e-6■□□□□ 8.9
LGR5-206ENST00000550851 SF3A3Q12874 501 aaKnown RBP eCLIP12.76□□□□□ -0.373e-7■□□□□ 8.6
LGR5-206ENST00000550851 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.44□□□□□ -0.423e-13■□□□□ 8.5
Retrieved 42 of 42 RNA–protein pairs in 33.6 ms