RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 AEBP2Q6ZN18 517 aaPredicted RBP22.99■■□□□ 1.27
SNHG1-222ENST00000545308 CHIC1Q5VXU3 224 aa21.88■■□□□ 1.09
SNHG1-222ENST00000545308 SENP3Q9H4L4 574 aaPredicted RBP19.61■□□□□ 0.73
SNHG1-222ENST00000545308 PHF23Q9BUL5 403 aaPredicted RBP19.36■□□□□ 0.69
SNHG1-222ENST00000545308 FOXD1Q16676 465 aa18.27■□□□□ 0.52
SNHG1-222ENST00000545308 PLPPR3Q6T4P5 718 aa17.5■□□□□ 0.39
SNHG1-222ENST00000545308 PPP6R1Q9UPN7 881 aa17.11■□□□□ 0.33
SNHG1-222ENST00000545308 MSH5O43196 834 aa17.09■□□□□ 0.33
SNHG1-222ENST00000545308 PIAS4Q8N2W9 510 aaPredicted RBP17.08■□□□□ 0.32
SNHG1-222ENST00000545308 ADRA2BP18089 450 aa17.06■□□□□ 0.32
SNHG1-222ENST00000545308 POTEDQ86YR6 584 aa16.61■□□□□ 0.25
SNHG1-222ENST00000545308 MAPK8IP2Q13387 824 aaPredicted RBP15.65■□□□□ 0.1
SNHG1-222ENST00000545308 SCAF1Q9H7N4 1312 aaKnown RBP15.62■□□□□ 0.09
SNHG1-222ENST00000545308 DMRT2Q9Y5R5 561 aa15.56■□□□□ 0.08
SNHG1-222ENST00000545308 PPP4R3CPQ6ZMV5 832 aa15.34■□□□□ 0.05
SNHG1-222ENST00000545308 CNKSR2Q8WXI2 1034 aa15.05■□□□□ -0
SNHG1-222ENST00000545308 HOXD11P31277 338 aaPredicted RBP15.01□□□□□ -0.01
SNHG1-222ENST00000545308 RNF216Q9NWF9 866 aaPredicted RBP14.91□□□□□ -0.02
SNHG1-222ENST00000545308 DCAF8L1A6NGE4 600 aa14.89□□□□□ -0.03
SNHG1-222ENST00000545308 NCBP3Q53F19 620 aaKnown RBP14.76□□□□□ -0.05
SNHG1-222ENST00000545308 CACNB1Q02641 598 aaPredicted RBP14.63□□□□□ -0.07
SNHG1-222ENST00000545308 RNF39Q9H2S5 420 aa14.59□□□□□ -0.07
SNHG1-222ENST00000545308 NPM3O75607 178 aaKnown RBP14.55□□□□□ -0.08
SNHG1-222ENST00000545308 DNAJC5BQ9UF47 199 aa14.5□□□□□ -0.09
SNHG1-222ENST00000545308 C1QBPQ07021 282 aaKnown RBP14.38□□□□□ -0.11
SNHG1-222ENST00000545308 KCNA4P22459 653 aa14.3□□□□□ -0.12
SNHG1-222ENST00000545308 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.28□□□□□ -0.12
SNHG1-222ENST00000545308 U3KPZ7 1027 aaPredicted RBP13.99□□□□□ -0.17
SNHG1-222ENST00000545308 SLC4A2P04920 1241 aa13.88□□□□□ -0.19
SNHG1-222ENST00000545308 SPINK5Q9NQ38 1064 aaPredicted RBP13.78□□□□□ -0.2
SNHG1-222ENST00000545308 CAPN15O75808 1086 aa13.75□□□□□ -0.21
SNHG1-222ENST00000545308 DSG3P32926 999 aa13.67□□□□□ -0.22
SNHG1-222ENST00000545308 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.62□□□□□ -0.23
SNHG1-222ENST00000545308 HNRNPUL2Q1KMD3 747 aaKnown RBP13.62□□□□□ -0.23
SNHG1-222ENST00000545308 APLP2Q06481 763 aa13.61□□□□□ -0.23
SNHG1-222ENST00000545308 TRHP20396 242 aaPredicted RBP13.53□□□□□ -0.24
SNHG1-222ENST00000545308 SAMD1Q6SPF0 538 aaPredicted RBP13.53□□□□□ -0.24
SNHG1-222ENST00000545308 ZNF219Q9P2Y4 722 aaPredicted RBP13.52□□□□□ -0.25
SNHG1-222ENST00000545308 SLC4A1APQ9BWU0 796 aaKnown RBP13.5□□□□□ -0.25
SNHG1-222ENST00000545308 MYCNP04198 464 aaPredicted RBP13.46□□□□□ -0.25
SNHG1-222ENST00000545308 ABCB7O75027 752 aa13.42□□□□□ -0.26
SNHG1-222ENST00000545308 FOXD4L1Q9NU39 408 aa13.33□□□□□ -0.28
SNHG1-222ENST00000545308 POLA2Q14181 598 aa13.19□□□□□ -0.3
SNHG1-222ENST00000545308 ZBTB22O15209 634 aa13.14□□□□□ -0.31
SNHG1-222ENST00000545308 ATF5Q9Y2D1 282 aaPredicted RBP13.14□□□□□ -0.31
SNHG1-222ENST00000545308 RBM42Q9BTD8 480 aaKnown RBP13.04□□□□□ -0.32
SNHG1-222ENST00000545308 POTEHQ6S545 545 aa13.02□□□□□ -0.33
SNHG1-222ENST00000545308 ATXN8OSP0DMR3 200 aa12.93□□□□□ -0.34
SNHG1-222ENST00000545308 ZBTB12Q9Y330 459 aaPredicted RBP12.93□□□□□ -0.34
SNHG1-222ENST00000545308 AKT1S1Q96B36 256 aa12.76□□□□□ -0.37
SNHG1-222ENST00000545308 OSCARQ8IYS5 282 aa12.75□□□□□ -0.37
SNHG1-222ENST00000545308 CHRDL2Q6WN34 429 aa12.74□□□□□ -0.37
SNHG1-222ENST00000545308 FBLN2P98095 1184 aa12.63□□□□□ -0.39
SNHG1-222ENST00000545308 REM2Q8IYK8 340 aaPredicted RBP12.63□□□□□ -0.39
SNHG1-222ENST00000545308 CSRNP3Q8WYN3 585 aa12.58□□□□□ -0.4
SNHG1-222ENST00000545308 SPDYE2BA6NHP3 402 aa12.54□□□□□ -0.4
SNHG1-222ENST00000545308 SPDYE6P0CI01 402 aa12.54□□□□□ -0.4
SNHG1-222ENST00000545308 MKRN4PQ13434 485 aaPredicted RBP12.54□□□□□ -0.4
SNHG1-222ENST00000545308 SPDYE2Q495Y8 402 aa12.54□□□□□ -0.4
SNHG1-222ENST00000545308 PITPNM1O00562 1244 aa12.49□□□□□ -0.41
SNHG1-222ENST00000545308 PIP4P2Q8N4L2 257 aa12.45□□□□□ -0.42
SNHG1-222ENST00000545308 EHMT2Q96KQ7 1210 aa12.41□□□□□ -0.42
SNHG1-222ENST00000545308 FXR2P51116 673 aaKnown RBP eCLIP12.38□□□□□ -0.43
SNHG1-222ENST00000545308 ZNF692Q9BU19 519 aaPredicted RBP12.38□□□□□ -0.43
SNHG1-222ENST00000545308 SSUH2Q9Y2M2 353 aa12.37□□□□□ -0.43
SNHG1-222ENST00000545308 SPDYE1Q8NFV5 336 aaPredicted RBP12.31□□□□□ -0.44
SNHG1-222ENST00000545308 CLEC11AQ9Y240 323 aa12.27□□□□□ -0.45
SNHG1-222ENST00000545308 SP7Q8TDD2 431 aaPredicted RBP12.23□□□□□ -0.45
SNHG1-222ENST00000545308 HAX1O00165 279 aa12.2□□□□□ -0.46
SNHG1-222ENST00000545308 PABPN1Q86U42 306 aaKnown RBP eCLIP12.2□□□□□ -0.46
SNHG1-222ENST00000545308 PRKAR2AP13861 404 aaKnown RBP12.17□□□□□ -0.46
SNHG1-222ENST00000545308 PRR29P0C7W0 189 aa12.08□□□□□ -0.48
SNHG1-222ENST00000545308 EVX2Q03828 476 aa12.06□□□□□ -0.48
SNHG1-222ENST00000545308 CHADLQ6NUI6 762 aa12.03□□□□□ -0.48
SNHG1-222ENST00000545308 C19orf67A6NJJ6 358 aa11.99□□□□□ -0.49
SNHG1-222ENST00000545308 SPDYE4A6NLX3 237 aa11.96□□□□□ -0.49
SNHG1-222ENST00000545308 STAG3Q9UJ98 1225 aa11.89□□□□□ -0.51
SNHG1-222ENST00000545308 FARP1Q9Y4F1 1045 aaPredicted RBP11.87□□□□□ -0.51
SNHG1-222ENST00000545308 GABBR2O75899 941 aa11.8□□□□□ -0.52
SNHG1-222ENST00000545308 CREBZFQ9NS37 354 aa11.79□□□□□ -0.52
SNHG1-222ENST00000545308 CD44P16070 742 aaKnown RBP11.78□□□□□ -0.52
SNHG1-222ENST00000545308 PROM2Q8N271 834 aa11.69□□□□□ -0.54
SNHG1-222ENST00000545308 CLCN6P51797 869 aa11.65□□□□□ -0.54
SNHG1-222ENST00000545308 ZRANB1Q9UGI0 708 aa11.62□□□□□ -0.55
SNHG1-222ENST00000545308 MNX1P50219 401 aaPredicted RBP11.61□□□□□ -0.55
SNHG1-222ENST00000545308 ZNF579Q8NAF0 562 aaKnown RBP11.61□□□□□ -0.55
SNHG1-222ENST00000545308 NPM1P06748 294 aaKnown RBP eCLIP11.58□□□□□ -0.56
SNHG1-222ENST00000545308 POTEIP0CG38 1075 aa11.55□□□□□ -0.56
SNHG1-222ENST00000545308 PAK3O75914 559 aaPredicted RBP11.54□□□□□ -0.56
SNHG1-222ENST00000545308 LHX8Q68G74 356 aa11.48□□□□□ -0.57
SNHG1-222ENST00000545308 DCBLD2Q96PD2 775 aa11.48□□□□□ -0.57
SNHG1-222ENST00000545308 GALR2O43603 387 aaPredicted RBP11.46□□□□□ -0.57
SNHG1-222ENST00000545308 PHF12Q96QT6 1004 aa11.46□□□□□ -0.57
SNHG1-222ENST00000545308 MIER1Q8N108 512 aa11.41□□□□□ -0.58
SNHG1-222ENST00000545308 PLEKHG5O94827 1062 aa11.39□□□□□ -0.59
SNHG1-222ENST00000545308 FKBP8Q14318 412 aa11.39□□□□□ -0.59
SNHG1-222ENST00000545308 TSPYL2Q9H2G4 693 aaPredicted RBP11.36□□□□□ -0.59
SNHG1-222ENST00000545308 CCDC61Q9Y6R9 512 aa11.32□□□□□ -0.6
SNHG1-222ENST00000545308 PLCD3Q8N3E9 789 aa11.31□□□□□ -0.6
SNHG1-222ENST00000545308 MS4A3Q96HJ5 214 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms