RNA: ENST00000537882.2

NDRG1-229, Transcript of N-myc downstream regulated 1, humanhuman

TSL 2 BASIC

Gene NDRG1, Length 2,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-229ENST00000537882 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.84□□□□□ -0.512e-7■■■■■ 365.2
NDRG1-229ENST00000537882 SF3B1O75533 1304 aaKnown RBP eCLIP11.84□□□□□ -0.514e-7■■■■■ 170.7
NDRG1-229ENST00000537882 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.59□□□□□ -0.398e-7■■■■■ 56.6
NDRG1-229ENST00000537882 UPF1Q92900 1129 aaKnown RBP eCLIP10.69□□□□□ -0.74e-8■■■■■ 51.5
NDRG1-229ENST00000537882 PTBP1P26599 531 aaKnown RBP eCLIP10.93□□□□□ -0.665e-9■■■■■ 46.3
NDRG1-229ENST00000537882 ILF3Q12906 894 aaKnown RBP eCLIP10.47□□□□□ -0.733e-13■■■■■ 44.7
NDRG1-229ENST00000537882 RBFOX2O43251 390 aaKnown RBP eCLIP9.65□□□□□ -0.879e-11■■■■■ 38.6
NDRG1-229ENST00000537882 MATR3P43243 847 aaKnown RBP eCLIP12.61□□□□□ -0.395e-10■■■■■ 36.5
NDRG1-229ENST00000537882 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.94□□□□□ -0.829e-9■■■■■ 36.3
NDRG1-229ENST00000537882 EWSR1Q01844 656 aaKnown RBP eCLIP9.97□□□□□ -0.816e-9■■■■■ 33.2
NDRG1-229ENST00000537882 AQRO60306 1485 aaKnown RBP eCLIP15.2■□□□□ 0.021e-8■■■■■ 31.9
NDRG1-229ENST00000537882 FUBP3Q96I24 572 aaKnown RBP eCLIP10.78□□□□□ -0.681e-6■■■■■ 31.3
NDRG1-229ENST00000537882 EIF4G2P78344 907 aaKnown RBP eCLIP15.29■□□□□ 0.042e-6■■■■■ 29.6
NDRG1-229ENST00000537882 PCBP1Q15365 356 aaKnown RBP eCLIP10.84□□□□□ -0.675e-10■■■■■ 29.6
NDRG1-229ENST00000537882 POLR2GP62487 172 aaKnown RBP eCLIP10.78□□□□□ -0.684e-6■■■■■ 28.4
NDRG1-229ENST00000537882 SFPQP23246 707 aaKnown RBP eCLIP13.24□□□□□ -0.297e-7■■■■■ 28
NDRG1-229ENST00000537882 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.21□□□□□ -0.451e-6■■■■■ 26.9
NDRG1-229ENST00000537882 AKAP1Q92667 903 aaKnown RBP eCLIP10.98□□□□□ -0.656e-12■■■■□ 26.7
NDRG1-229ENST00000537882 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.39□□□□□ -0.598e-7■■■■□ 26.5
NDRG1-229ENST00000537882 NCBP2P52298 156 aaKnown RBP eCLIP10.41□□□□□ -0.742e-7■■■■□ 26.5
NDRG1-229ENST00000537882 GTF2F1P35269 517 aaKnown RBP eCLIP14.01□□□□□ -0.178e-7■■■■□ 24.4
NDRG1-229ENST00000537882 SF3A3Q12874 501 aaKnown RBP eCLIP12.36□□□□□ -0.435e-7■■■■□ 23.9
NDRG1-229ENST00000537882 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.39□□□□□ -0.432e-7■■■■□ 23.8
NDRG1-229ENST00000537882 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.11□□□□□ -0.637e-7■■■■□ 23.7
NDRG1-229ENST00000537882 DKC1O60832 514 aaKnown RBP eCLIP11.84□□□□□ -0.514e-8■■■■□ 22.5
NDRG1-229ENST00000537882 SF3B4Q15427 424 aaKnown RBP eCLIP11.55□□□□□ -0.562e-8■■■■□ 22
NDRG1-229ENST00000537882 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.02□□□□□ -0.653e-6■■■■□ 20.9
NDRG1-229ENST00000537882 RBM22Q9NW64 420 aaKnown RBP eCLIP11.05□□□□□ -0.643e-6■■■■□ 19.9
NDRG1-229ENST00000537882 TIAL1Q01085 375 aaKnown RBP eCLIP11.1□□□□□ -0.633e-7■■■□□ 19.1
NDRG1-229ENST00000537882 KHSRPQ92945 711 aaKnown RBP eCLIP11.34□□□□□ -0.591e-6■■■□□ 18.3
NDRG1-229ENST00000537882 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.7□□□□□ -0.227e-9■■■□□ 17.9
NDRG1-229ENST00000537882 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.86□□□□□ -1.153e-8■■■□□ 17.9
NDRG1-229ENST00000537882 EFTUD2Q15029 972 aaKnown RBP eCLIP11.88□□□□□ -0.516e-8■■■□□ 17.3
NDRG1-229ENST00000537882 PCBP2Q15366 365 aaKnown RBP eCLIP10.98□□□□□ -0.651e-12■■■□□ 17
NDRG1-229ENST00000537882 TAF15Q92804 592 aaKnown RBP eCLIP9.71□□□□□ -0.863e-6■■■□□ 16.5
NDRG1-229ENST00000537882 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.31□□□□□ -0.449e-7■■■□□ 16.3
NDRG1-229ENST00000537882 QKIQ96PU8 341 aaKnown RBP eCLIP11.45□□□□□ -0.582e-6■■■□□ 16
NDRG1-229ENST00000537882 PPIGQ13427 754 aaKnown RBP eCLIP10.95□□□□□ -0.665e-8■■■□□ 16
NDRG1-229ENST00000537882 CDC40O60508 579 aaKnown RBP eCLIP10.32□□□□□ -0.763e-9■■■□□ 15.8
NDRG1-229ENST00000537882 U2AF2P26368 475 aaKnown RBP eCLIP13.81□□□□□ -0.21e-6■■■□□ 15.7
NDRG1-229ENST00000537882 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.53□□□□□ -0.563e-7■■■□□ 15.3
NDRG1-229ENST00000537882 RPS3P23396 243 aaKnown RBP eCLIP11□□□□□ -0.656e-8■■■□□ 14.7
NDRG1-229ENST00000537882 HNRNPMP52272 730 aaKnown RBP eCLIP14.04□□□□□ -0.163e-7■■□□□ 14.3
NDRG1-229ENST00000537882 PABPC4Q13310 644 aaKnown RBP eCLIP12.08□□□□□ -0.485e-8■■□□□ 13.9
NDRG1-229ENST00000537882 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.44■□□□□ 0.061e-6■■□□□ 13.9
NDRG1-229ENST00000537882 IGF2BP3O00425 579 aaKnown RBP eCLIP12.42□□□□□ -0.423e-6■■□□□ 13.6
NDRG1-229ENST00000537882 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.55□□□□□ -0.47e-7■■□□□ 13.6
NDRG1-229ENST00000537882 HNRNPLP14866 589 aaKnown RBP eCLIP11.36□□□□□ -0.595e-8■■□□□ 13.4
NDRG1-229ENST00000537882 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.39□□□□□ -0.592e-6■■□□□ 13.3
NDRG1-229ENST00000537882 PRPF4O43172 522 aaKnown RBP eCLIP12.1□□□□□ -0.473e-7■■□□□ 12.8
NDRG1-229ENST00000537882 RBM5P52756 815 aaKnown RBP eCLIP12.35□□□□□ -0.432e-7■■□□□ 12.4
NDRG1-229ENST00000537882 DDX3XO00571 662 aaKnown RBP eCLIP12.19□□□□□ -0.462e-7■■□□□ 12.4
NDRG1-229ENST00000537882 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.33□□□□□ -0.442e-10■■□□□ 12.3
NDRG1-229ENST00000537882 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.52□□□□□ -0.731e-7■■□□□ 12.2
NDRG1-229ENST00000537882 NKRFO15226 690 aaKnown RBP eCLIP12.41□□□□□ -0.428e-7■■□□□ 12.1
NDRG1-229ENST00000537882 FUSP35637 526 aaKnown RBP eCLIP7.74□□□□□ -1.172e-7■■□□□ 11.4
NDRG1-229ENST00000537882 TROVE2P10155 538 aaKnown RBP eCLIP12.06□□□□□ -0.487e-6■□□□□ 11.1
NDRG1-229ENST00000537882 YBX3P16989 372 aaKnown RBP eCLIP11.63□□□□□ -0.554e-6■□□□□ 11
NDRG1-229ENST00000537882 EIF3HO15372 352 aaKnown RBP eCLIP12.89□□□□□ -0.353e-6■□□□□ 10.7
NDRG1-229ENST00000537882 ZC3H11AO75152 810 aaKnown RBP eCLIP11.72□□□□□ -0.534e-8■□□□□ 10.3
NDRG1-229ENST00000537882 EIF3DO15371 548 aaKnown RBP eCLIP11.96□□□□□ -0.53e-9■□□□□ 10
NDRG1-229ENST00000537882 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.97□□□□□ -0.175e-9■□□□□ 9.9
NDRG1-229ENST00000537882 CSTF2P33240 577 aaKnown RBP eCLIP11.1□□□□□ -0.631e-11■□□□□ 9.9
NDRG1-229ENST00000537882 NIP7Q9Y221 180 aaKnown RBP eCLIP12.03□□□□□ -0.482e-6■□□□□ 9.7
NDRG1-229ENST00000537882 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.29□□□□□ -0.281e-7■□□□□ 9.2
NDRG1-229ENST00000537882 PABPN1Q86U42 306 aaKnown RBP eCLIP15.57■□□□□ 0.087e-17■□□□□ 9
NDRG1-229ENST00000537882 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.46□□□□□ -0.263e-6■□□□□ 8.9
NDRG1-229ENST00000537882 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.06□□□□□ -0.485e-10■□□□□ 8.6
NDRG1-229ENST00000537882 LARP4Q71RC2 724 aaKnown RBP eCLIP11.36□□□□□ -0.594e-17■□□□□ 8.2
Retrieved 69 of 69 RNA–protein pairs in 32.9 ms