RNA: ENST00000537024.5

SNHG1-203, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-203ENST00000537024 DDX21Q9NR30 783 aaKnown RBP eCLIP5.4□□□□□ -1.541e-323■■■□□ 15.6
SNHG1-203ENST00000537024 NOLC1Q14978 699 aaKnown RBP eCLIP4.84□□□□□ -1.631e-323■■■■■ 39
SNHG1-203ENST00000537024 AATFQ9NY61 560 aaKnown RBP eCLIP4.34□□□□□ -1.711e-323■□□□□ 9
SNHG1-203ENST00000537024 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.14□□□□□ -1.754e-59■■■□□ 16.1
SNHG1-203ENST00000537024 TRA2AQ13595 282 aaKnown RBP eCLIP3.65□□□□□ -1.832e-56■■■■□ 20.9
SNHG1-203ENST00000537024 PTBP1P26599 531 aaKnown RBP eCLIP3.05□□□□□ -1.923e-55■■□□□ 13.5
SNHG1-203ENST00000537024 SF3B4Q15427 424 aaKnown RBP eCLIP3.6□□□□□ -1.834e-47■■■■■ 46.5
SNHG1-203ENST00000537024 EFTUD2Q15029 972 aaKnown RBP eCLIP3.34□□□□□ -1.872e-44■■■■■ 44.3
SNHG1-203ENST00000537024 NIP7Q9Y221 180 aaKnown RBP eCLIP4.99□□□□□ -1.614e-44■■■■■ 26.8
SNHG1-203ENST00000537024 DKC1O60832 514 aaKnown RBP eCLIP3.99□□□□□ -1.772e-36■■□□□ 13.2
SNHG1-203ENST00000537024 GPKOWQ92917 476 aaPredicted RBP eCLIP6.64□□□□□ -1.355e-32■■■■□ 19.3
SNHG1-203ENST00000537024 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.95□□□□□ -1.466e-32■□□□□ 8.9
SNHG1-203ENST00000537024 NIPBLQ6KC79 2804 aaeCLIP4.02□□□□□ -1.779e-27■■■■□ 23
SNHG1-203ENST00000537024 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.39□□□□□ -1.712e-26■□□□□ 8.9
SNHG1-203ENST00000537024 AARSP49588 968 aaKnown RBP eCLIP4.38□□□□□ -1.715e-21■□□□□ 9.8
SNHG1-203ENST00000537024 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.69□□□□□ -1.823e-19■■■■■ 75
SNHG1-203ENST00000537024 SF3A3Q12874 501 aaKnown RBP eCLIP4.32□□□□□ -1.726e-19■■■□□ 14.9
SNHG1-203ENST00000537024 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.79□□□□□ -1.481e-17■■■□□ 16.5
SNHG1-203ENST00000537024 U2AF2P26368 475 aaKnown RBP eCLIP4□□□□□ -1.772e-14■■■□□ 16.7
SNHG1-203ENST00000537024 SMNDC1O75940 238 aaKnown RBP eCLIP5.76□□□□□ -1.493e-14■■■■■ 31.4
SNHG1-203ENST00000537024 AQRO60306 1485 aaKnown RBP eCLIP7.56□□□□□ -1.23e-14■■■■■ 50.7
SNHG1-203ENST00000537024 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.12□□□□□ -1.916e-13■■□□□ 14.1
SNHG1-203ENST00000537024 KHSRPQ92945 711 aaKnown RBP eCLIP7.67□□□□□ -1.182e-12■■□□□ 11.6
SNHG1-203ENST00000537024 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.98□□□□□ -1.452e-12■■□□□ 11.6
SNHG1-203ENST00000537024 SRSF1Q07955 248 aaKnown RBP eCLIP4.45□□□□□ -1.75e-12■■□□□ 12.5
SNHG1-203ENST00000537024 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.38□□□□□ -1.712e-11■■■■■ 59.4
SNHG1-203ENST00000537024 CDC40O60508 579 aaKnown RBP eCLIP3.36□□□□□ -1.875e-11■□□□□ 11.3
SNHG1-203ENST00000537024 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.61□□□□□ -1.832e-10■■■■■ 51.6
SNHG1-203ENST00000537024 RBM22Q9NW64 420 aaKnown RBP eCLIP3.13□□□□□ -1.914e-10■■■■□ 19.9
SNHG1-203ENST00000537024 ZRANB2O95218 330 aaKnown RBP eCLIP4.9□□□□□ -1.633e-9■■■■■ 27.5
SNHG1-203ENST00000537024 SLBPQ14493 270 aaKnown RBP eCLIP5.4□□□□□ -1.542e-8■□□□□ 9.6
SNHG1-203ENST00000537024 U2AF1Q01081 240 aaKnown RBP eCLIP5□□□□□ -1.614e-8■■□□□ 13.4
SNHG1-203ENST00000537024 SF3B1O75533 1304 aaKnown RBP eCLIP4.01□□□□□ -1.772e-7■■■■□ 23.8
SNHG1-203ENST00000537024 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.92□□□□□ -1.621e-6■■□□□ 14.4
SNHG1-203ENST00000537024 TIA1P31483 386 aaKnown RBP eCLIP3.59□□□□□ -1.833e-6■■■■□ 22.3
SNHG1-203ENST00000537024 DDX42Q86XP3 938 aaKnown RBP eCLIP5.25□□□□□ -1.577e-6■■■□□ 16.5
Retrieved 36 of 36 RNA–protein pairs in 20.4 ms