RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.99□□□□□ -0.657e-22■■■■■ 89.9
CAPN1-228ENST00000534373 AATFQ9NY61 560 aaKnown RBP eCLIP16.36■□□□□ 0.216e-6■■■■■ 54.7
CAPN1-228ENST00000534373 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.14□□□□□ -0.152e-14■■■■■ 49.7
CAPN1-228ENST00000534373 METAP2P50579 478 aaKnown RBP eCLIP15.33■□□□□ 0.043e-8■■■■■ 34.2
CAPN1-228ENST00000534373 DDX3XO00571 662 aaKnown RBP eCLIP13.56□□□□□ -0.243e-11■■■■■ 33.2
CAPN1-228ENST00000534373 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.85■■□□□ 1.091e-9■■■■□ 24
CAPN1-228ENST00000534373 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.22■□□□□ 0.194e-8■■■■□ 22.5
CAPN1-228ENST00000534373 GTF2F1P35269 517 aaKnown RBP eCLIP14.95□□□□□ -0.024e-13■■■■□ 21.8
CAPN1-228ENST00000534373 AQRO60306 1485 aaKnown RBP eCLIP23.98■■□□□ 1.434e-7■■■■□ 19.3
CAPN1-228ENST00000534373 PRPF4O43172 522 aaKnown RBP eCLIP12.79□□□□□ -0.362e-6■■■□□ 17.7
CAPN1-228ENST00000534373 EFTUD2Q15029 972 aaKnown RBP eCLIP12.53□□□□□ -0.42e-6■■■□□ 17
CAPN1-228ENST00000534373 PPIGQ13427 754 aaKnown RBP eCLIP15.59■□□□□ 0.092e-6■■■□□ 16.9
CAPN1-228ENST00000534373 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.48□□□□□ -0.572e-7■■■□□ 15.2
CAPN1-228ENST00000534373 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.39■□□□□ 0.532e-6■■□□□ 11.9
CAPN1-228ENST00000534373 NCBP2P52298 156 aaKnown RBP eCLIP12.19□□□□□ -0.462e-8■□□□□ 10.4
CAPN1-228ENST00000534373 YBX3P16989 372 aaKnown RBP eCLIP17.95■□□□□ 0.463e-6■□□□□ 8.1
Retrieved 16 of 16 RNA–protein pairs in 13.2 ms