RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 Q1T7F1 81 aa4.77□□□□□ -1.65
CAPN1-228ENST00000534373 MT1MQ8N339 61 aa4.75□□□□□ -1.65
CAPN1-228ENST00000534373 MT1LQ93083 61 aa4.75□□□□□ -1.65
CAPN1-228ENST00000534373 C10orf95Q9H7T3 257 aa4.74□□□□□ -1.65
CAPN1-228ENST00000534373 RPS28P62857 69 aaKnown RBP4.72□□□□□ -1.65
CAPN1-228ENST00000534373 LCE3AQ5TA76 89 aa4.72□□□□□ -1.65
CAPN1-228ENST00000534373 LCE4AQ5TA78 99 aa4.72□□□□□ -1.65
CAPN1-228ENST00000534373 GPR98Q8WXG9 6306 aa4.72□□□□□ -1.65
CAPN1-228ENST00000534373 LCE1DQ5T752 114 aa4.69□□□□□ -1.66
CAPN1-228ENST00000534373 A6NED7 52 aa4.66□□□□□ -1.66
CAPN1-228ENST00000534373 K7ERS5 55 aa4.66□□□□□ -1.66
CAPN1-228ENST00000534373 HMCN1Q96RW7 5635 aa4.62□□□□□ -1.67
CAPN1-228ENST00000534373 MT4P47944 62 aa4.61□□□□□ -1.67
CAPN1-228ENST00000534373 KRTAP5-4Q6L8H1 288 aa4.61□□□□□ -1.67
CAPN1-228ENST00000534373 KRTAP4-3Q9BYR4 195 aa4.6□□□□□ -1.67
CAPN1-228ENST00000534373 KRTAP12-3P60328 96 aa4.57□□□□□ -1.68
CAPN1-228ENST00000534373 KRTAP25-1Q3LHN0 102 aa4.5□□□□□ -1.69
CAPN1-228ENST00000534373 KRTAP4-6Q9BYQ5 205 aa4.49□□□□□ -1.69
CAPN1-228ENST00000534373 KRTAP4-7Q9BYR0 210 aa4.48□□□□□ -1.69
CAPN1-228ENST00000534373 AHNAK2Q8IVF2 5795 aa4.46□□□□□ -1.7
CAPN1-228ENST00000534373 CDC42SE1Q9NRR8 79 aa4.45□□□□□ -1.7
CAPN1-228ENST00000534373 KRTAP19-4Q3LI73 84 aa4.42□□□□□ -1.7
CAPN1-228ENST00000534373 KRTAP5-10Q6L8G5 202 aa4.41□□□□□ -1.7
CAPN1-228ENST00000534373 KRTAP5-5Q701N2 237 aaPredicted RBP4.38□□□□□ -1.71
CAPN1-228ENST00000534373 ROMO1P60602 79 aa4.36□□□□□ -1.71
CAPN1-228ENST00000534373 SPRR5A0A1B0GTR4 108 aa4.35□□□□□ -1.71
CAPN1-228ENST00000534373 KRTAP23-1A1A580 65 aa4.35□□□□□ -1.71
CAPN1-228ENST00000534373 KRTAP20-2Q3LI61 65 aa4.33□□□□□ -1.72
CAPN1-228ENST00000534373 KRTAP12-4P60329 112 aa4.32□□□□□ -1.72
CAPN1-228ENST00000534373 KRTAP5-3Q6L8H2 238 aa4.29□□□□□ -1.72
CAPN1-228ENST00000534373 KRTAP5-7Q6L8G8 165 aa4.26□□□□□ -1.73
CAPN1-228ENST00000534373 LOC100996750A0A140TA64 210 aa4.25□□□□□ -1.73
CAPN1-228ENST00000534373 KRTAP15-1Q3LI76 137 aa4.25□□□□□ -1.73
CAPN1-228ENST00000534373 BRK1Q8WUW1 75 aa4.23□□□□□ -1.73
CAPN1-228ENST00000534373 LCE3CQ5T5A8 94 aa4.21□□□□□ -1.74
CAPN1-228ENST00000534373 PRO0628Q9UI54 55 aa4.19□□□□□ -1.74
CAPN1-228ENST00000534373 SYNE1Q8NF91 8797 aaKnown RBP4.19□□□□□ -1.74
CAPN1-228ENST00000534373 MT1AP04731 61 aa4.06□□□□□ -1.76
CAPN1-228ENST00000534373 PMAIP1Q13794 54 aa4.03□□□□□ -1.76
CAPN1-228ENST00000534373 KRTAP5-2Q701N4 177 aa4.02□□□□□ -1.77
CAPN1-228ENST00000534373 KRTAP6-1Q3LI64 71 aa4.01□□□□□ -1.77
CAPN1-228ENST00000534373 KRTAP4-11Q9BYQ6 195 aa3.99□□□□□ -1.77
CAPN1-228ENST00000534373 KRTAP9-4Q9BYQ2 154 aa3.95□□□□□ -1.78
CAPN1-228ENST00000534373 KRTAP9-6A8MVA2 160 aa3.93□□□□□ -1.78
CAPN1-228ENST00000534373 SVIPQ8NHG7 77 aa3.9□□□□□ -1.79
CAPN1-228ENST00000534373 KTN1-AS1Q86SY8 53 aa3.87□□□□□ -1.79
CAPN1-228ENST00000534373 KRTAP6-2Q3LI66 62 aa3.85□□□□□ -1.79
CAPN1-228ENST00000534373 KRTAP5-8O75690 187 aa3.84□□□□□ -1.79
CAPN1-228ENST00000534373 PRAC1Q96KF2 57 aa3.8□□□□□ -1.8
CAPN1-228ENST00000534373 OBSCNQ5VST9 7968 aa3.77□□□□□ -1.81
CAPN1-228ENST00000534373 MT3P25713 68 aa3.74□□□□□ -1.81
CAPN1-228ENST00000534373 H3BS24 57 aa3.71□□□□□ -1.82
CAPN1-228ENST00000534373 MUC5BQ9HC84 5762 aaPredicted RBP3.7□□□□□ -1.82
CAPN1-228ENST00000534373 MUC5ACP98088 5654 aa3.69□□□□□ -1.82
CAPN1-228ENST00000534373 AHNAKQ09666 5890 aaKnown RBP3.69□□□□□ -1.82
CAPN1-228ENST00000534373 KRTAP9-9Q9BYP9 154 aa3.67□□□□□ -1.82
CAPN1-228ENST00000534373 KRTAP5-1Q6L8H4 278 aa3.61□□□□□ -1.83
CAPN1-228ENST00000534373 LCE1EQ5T753 118 aa3.48□□□□□ -1.85
CAPN1-228ENST00000534373 KRTAP4-2Q9BYR5 136 aa3.24□□□□□ -1.89
CAPN1-228ENST00000534373 LCE1CQ5T751 118 aa3.22□□□□□ -1.89
CAPN1-228ENST00000534373 LCE1BQ5T7P3 118 aa3.22□□□□□ -1.89
CAPN1-228ENST00000534373 LUZP6Q538Z0 58 aa3.17□□□□□ -1.9
CAPN1-228ENST00000534373 A0A0A0MQY5 61 aa3.09□□□□□ -1.91
CAPN1-228ENST00000534373 LCE3DQ9BYE3 92 aa3.03□□□□□ -1.92
CAPN1-228ENST00000534373 NDUFAF8A1L188 74 aa2.97□□□□□ -1.93
CAPN1-228ENST00000534373 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.92□□□□□ -1.94
CAPN1-228ENST00000534373 KRTAP4-12Q9BQ66 201 aa2.92□□□□□ -1.94
CAPN1-228ENST00000534373 KRTAP5-11Q6L8G4 156 aa2.9□□□□□ -1.95
CAPN1-228ENST00000534373 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
CAPN1-228ENST00000534373 LCE3EQ5T5B0 92 aa2.83□□□□□ -1.96
CAPN1-228ENST00000534373 KRTAP21-2Q3LI59 83 aa2.66□□□□□ -1.98
CAPN1-228ENST00000534373 INE1O15225 51 aa2.57□□□□□ -2
CAPN1-228ENST00000534373 PHGR1C9JFL3 82 aa2.56□□□□□ -2
CAPN1-228ENST00000534373 KRTAP4-4Q9BYR3 166 aa2.4□□□□□ -2.03
CAPN1-228ENST00000534373 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
CAPN1-228ENST00000534373 PRM1P04553 51 aa2.26□□□□□ -2.05
CAPN1-228ENST00000534373 KRTAP21-1Q3LI58 79 aa1.98□□□□□ -2.09
CAPN1-228ENST00000534373 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 87.1 ms