RNA: ENST00000534286.5

SORL1-212, Transcript of sortilin related receptor 1, humanhuman

TSL 2 BASIC

Gene SORL1, Length 3,501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-212ENST00000534286 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.05□□□□□ -1.129e-14■■□□□ 13.9
SORL1-212ENST00000534286 FXR2P51116 673 aaKnown RBP eCLIP8.61□□□□□ -1.033e-12■■□□□ 13.1
SORL1-212ENST00000534286 EIF3DO15371 548 aaKnown RBP eCLIP8.42□□□□□ -1.066e-12■□□□□ 8.6
SORL1-212ENST00000534286 RBM22Q9NW64 420 aaKnown RBP eCLIP7.92□□□□□ -1.148e-10■■■■■ 48.1
SORL1-212ENST00000534286 PRPF4O43172 522 aaKnown RBP eCLIP8.34□□□□□ -1.072e-9■□□□□ 9.8
SORL1-212ENST00000534286 PTBP1P26599 531 aaKnown RBP eCLIP8.3□□□□□ -1.082e-9■□□□□ 10.4
SORL1-212ENST00000534286 SF3B4Q15427 424 aaKnown RBP eCLIP8.83□□□□□ -12e-8■■■■■ 40
SORL1-212ENST00000534286 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.14□□□□□ -0.953e-8■□□□□ 10.4
SORL1-212ENST00000534286 MATR3P43243 847 aaKnown RBP eCLIP9.41□□□□□ -0.93e-8■■■■□ 21.1
SORL1-212ENST00000534286 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.44□□□□□ -0.746e-8■□□□□ 9.1
SORL1-212ENST00000534286 TIAL1Q01085 375 aaKnown RBP eCLIP7.85□□□□□ -1.158e-8■■■■□ 25.6
SORL1-212ENST00000534286 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.15□□□□□ -1.429e-8■■■■■ 31.4
SORL1-212ENST00000534286 PABPN1Q86U42 306 aaKnown RBP eCLIP12.12□□□□□ -0.471e-7■□□□□ 8.9
SORL1-212ENST00000534286 G3BP1Q13283 466 aaKnown RBP eCLIP9.32□□□□□ -0.922e-7■□□□□ 11.2
SORL1-212ENST00000534286 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.96□□□□□ -0.982e-7■■■■□ 22.2
SORL1-212ENST00000534286 SF3A3Q12874 501 aaKnown RBP eCLIP8.84□□□□□ -0.994e-7■■■■□ 22
SORL1-212ENST00000534286 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.27□□□□□ -1.094e-7■■■■□ 22.1
SORL1-212ENST00000534286 PPIGQ13427 754 aaKnown RBP eCLIP7.72□□□□□ -1.175e-7■■□□□ 14
SORL1-212ENST00000534286 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.96□□□□□ -0.815e-7■■■□□ 17.4
SORL1-212ENST00000534286 YBX3P16989 372 aaKnown RBP eCLIP8.13□□□□□ -1.118e-7■■□□□ 12.1
SORL1-212ENST00000534286 EFTUD2Q15029 972 aaKnown RBP eCLIP8.59□□□□□ -1.039e-7■■■□□ 17.9
SORL1-212ENST00000534286 SND1Q7KZF4 910 aaKnown RBP eCLIP8.9□□□□□ -0.999e-7■■■□□ 16.7
SORL1-212ENST00000534286 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.46□□□□□ -0.899e-7■■■□□ 15.2
SORL1-212ENST00000534286 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.42□□□□□ -1.221e-6■■■□□ 18.2
SORL1-212ENST00000534286 AQRO60306 1485 aaKnown RBP eCLIP11.14□□□□□ -0.632e-6■■■■□ 25.1
SORL1-212ENST00000534286 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.43□□□□□ -0.92e-6■■■□□ 17.4
SORL1-212ENST00000534286 EIF3HO15372 352 aaKnown RBP eCLIP9.03□□□□□ -0.962e-6■■■■□ 20
SORL1-212ENST00000534286 RPS3P23396 243 aaKnown RBP eCLIP8.03□□□□□ -1.122e-6■□□□□ 8.9
SORL1-212ENST00000534286 FUBP3Q96I24 572 aaKnown RBP eCLIP7.96□□□□□ -1.143e-6■■■■■ 68.4
SORL1-212ENST00000534286 U2AF2P26368 475 aaKnown RBP eCLIP10.06□□□□□ -0.83e-6■■□□□ 12.4
SORL1-212ENST00000534286 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.56□□□□□ -0.887e-6■■□□□ 12.3
SORL1-212ENST00000534286 SSBP05455 408 aaKnown RBP eCLIP9.23□□□□□ -0.931e-5■□□□□ 10.2
Retrieved 32 of 32 RNA–protein pairs in 18.8 ms