RNA: ENST00000532461.5

RDX-213, Transcript of radixin, humanhuman

TSL 1 (best)

Gene RDX, Length 3,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-213ENST00000532461 TARDBPQ13148 414 aaKnown RBP eCLIP5.43□□□□□ -1.541e-45■■■■■ 53.8
RDX-213ENST00000532461 UPF1Q92900 1129 aaKnown RBP eCLIP5.89□□□□□ -1.472e-37■■□□□ 14.1
RDX-213ENST00000532461 EIF4G2P78344 907 aaKnown RBP eCLIP8.16□□□□□ -1.11e-35■■■■■ 36.1
RDX-213ENST00000532461 DKC1O60832 514 aaKnown RBP eCLIP6.25□□□□□ -1.412e-19■■■■□ 20.6
RDX-213ENST00000532461 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.65□□□□□ -1.512e-13■■■■■ 36.4
RDX-213ENST00000532461 FXR2P51116 673 aaKnown RBP eCLIP6.55□□□□□ -1.361e-12■□□□□ 10.8
RDX-213ENST00000532461 SRSF7Q16629 238 aaKnown RBP eCLIP5.1□□□□□ -1.595e-12■■■■■ 38.5
RDX-213ENST00000532461 ZNF622Q969S3 477 aaKnown RBP eCLIP6.29□□□□□ -1.41e-8■■□□□ 11.5
RDX-213ENST00000532461 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.67□□□□□ -1.57e-8■■□□□ 12.9
RDX-213ENST00000532461 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.78□□□□□ -1.481e-7■■■■■ 72
RDX-213ENST00000532461 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.59□□□□□ -1.351e-7■■■□□ 16.9
RDX-213ENST00000532461 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.4□□□□□ -1.553e-7■■□□□ 11.5
RDX-213ENST00000532461 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.12□□□□□ -1.273e-7■■■□□ 16.7
RDX-213ENST00000532461 TRA2AQ13595 282 aaKnown RBP eCLIP5.14□□□□□ -1.593e-7■■■■□ 23.7
RDX-213ENST00000532461 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.07□□□□□ -1.446e-7■■□□□ 12.2
RDX-213ENST00000532461 FUBP3Q96I24 572 aaKnown RBP eCLIP5.88□□□□□ -1.478e-7■□□□□ 9.5
RDX-213ENST00000532461 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.78□□□□□ -1.169e-7■■■■□ 20.1
RDX-213ENST00000532461 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.42□□□□□ -1.382e-6■□□□□ 11.3
RDX-213ENST00000532461 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.13□□□□□ -1.434e-6■■□□□ 12.4
RDX-213ENST00000532461 U2AF1Q01081 240 aaKnown RBP eCLIP7.44□□□□□ -1.226e-6■■■■□ 22.1
RDX-213ENST00000532461 TIA1P31483 386 aaKnown RBP eCLIP5.59□□□□□ -1.521e-5■□□□□ 11
RDX-213ENST00000532461 AGGF1Q8N302 714 aaeCLIP6.06□□□□□ -1.441e-5■■■■□ 19.6
Retrieved 22 of 22 RNA–protein pairs in 20.6 ms