RNA: ENST00000530875.5

NXF1-207, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best)

Gene NXF1, Length 1,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-207ENST00000530875 SF3B1O75533 1304 aaKnown RBP eCLIP14.81□□□□□ -0.043e-7■■■■■ 117.6
NXF1-207ENST00000530875 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.07■□□□□ 05e-6■■■■■ 74.2
NXF1-207ENST00000530875 PTBP1P26599 531 aaKnown RBP eCLIP12.05□□□□□ -0.483e-7■■■■■ 65.2
NXF1-207ENST00000530875 MATR3P43243 847 aaKnown RBP eCLIP15.23■□□□□ 0.031e-14■■■■■ 51.7
NXF1-207ENST00000530875 RBM15Q96T37 977 aaKnown RBP eCLIP14.15□□□□□ -0.141e-12■■■■■ 40.8
NXF1-207ENST00000530875 EFTUD2Q15029 972 aaKnown RBP eCLIP13.98□□□□□ -0.178e-7■■■■■ 38.2
NXF1-207ENST00000530875 GPKOWQ92917 476 aaPredicted RBP eCLIP16.11■□□□□ 0.172e-6■■■■■ 30.4
NXF1-207ENST00000530875 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.23□□□□□ -0.136e-7■■■■■ 27.2
NXF1-207ENST00000530875 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.83■□□□□ 0.282e-7■■■■□ 26.7
NXF1-207ENST00000530875 TRA2AQ13595 282 aaKnown RBP eCLIP13.21□□□□□ -0.36e-8■■■■□ 25.7
NXF1-207ENST00000530875 SF3A3Q12874 501 aaKnown RBP eCLIP13.8□□□□□ -0.25e-13■■■■□ 24.4
NXF1-207ENST00000530875 GTF2F1P35269 517 aaKnown RBP eCLIP15.01□□□□□ -0.019e-11■■■■□ 23
NXF1-207ENST00000530875 RBM5P52756 815 aaKnown RBP eCLIP16.62■□□□□ 0.254e-6■■■■□ 21.7
NXF1-207ENST00000530875 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.82□□□□□ -0.043e-8■■■■□ 20
NXF1-207ENST00000530875 AQRO60306 1485 aaKnown RBP eCLIP22.84■■□□□ 1.252e-7■■■□□ 19.2
NXF1-207ENST00000530875 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.09■□□□□ 0.012e-9■■■□□ 18.9
NXF1-207ENST00000530875 EIF3HO15372 352 aaKnown RBP eCLIP14.08□□□□□ -0.169e-8■■■□□ 18.9
NXF1-207ENST00000530875 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.27□□□□□ -0.611e-9■■■□□ 17.6
NXF1-207ENST00000530875 U2AF2P26368 475 aaKnown RBP eCLIP16.02■□□□□ 0.165e-10■■■□□ 17.1
NXF1-207ENST00000530875 DDX3XO00571 662 aaKnown RBP eCLIP14.86□□□□□ -0.032e-12■■■□□ 16.8
NXF1-207ENST00000530875 U2AF1Q01081 240 aaKnown RBP eCLIP18.57■□□□□ 0.565e-8■■■□□ 16.5
NXF1-207ENST00000530875 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.51■□□□□ 0.871e-7■■■□□ 16.1
NXF1-207ENST00000530875 PPIGQ13427 754 aaKnown RBP eCLIP14.93□□□□□ -0.027e-8■■■□□ 15.5
NXF1-207ENST00000530875 ZRANB2O95218 330 aaKnown RBP eCLIP14.56□□□□□ -0.087e-6■■■□□ 15
NXF1-207ENST00000530875 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.2■□□□□ 0.55e-8■■□□□ 13.9
NXF1-207ENST00000530875 SF3B4Q15427 424 aaKnown RBP eCLIP12.33□□□□□ -0.443e-6■■□□□ 13.4
NXF1-207ENST00000530875 RBM22Q9NW64 420 aaKnown RBP eCLIP14.21□□□□□ -0.134e-6■■□□□ 12.7
NXF1-207ENST00000530875 ZNF622Q969S3 477 aaKnown RBP eCLIP17.06■□□□□ 0.326e-8■■□□□ 11.4
NXF1-207ENST00000530875 NCBP2P52298 156 aaKnown RBP eCLIP13.11□□□□□ -0.312e-6■□□□□ 10.8
NXF1-207ENST00000530875 PCBP2Q15366 365 aaKnown RBP eCLIP13.56□□□□□ -0.249e-8■□□□□ 10.3
NXF1-207ENST00000530875 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.89□□□□□ -0.035e-8■□□□□ 10.1
NXF1-207ENST00000530875 PRPF4O43172 522 aaKnown RBP eCLIP13.78□□□□□ -0.24e-7■□□□□ 9.9
NXF1-207ENST00000530875 HNRNPMP52272 730 aaKnown RBP eCLIP21■□□□□ 0.952e-7■□□□□ 9.4
NXF1-207ENST00000530875 PABPN1Q86U42 306 aaKnown RBP eCLIP25.63■■□□□ 1.699e-7■□□□□ 8.3
Retrieved 34 of 34 RNA–protein pairs in 23.1 ms