RNA: ENST00000530346.5

GMDS-AS1-206, humanhuman

TSL 4

Gene GMDS-AS1, Length 594 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-AS1-206ENST00000530346 SF3B1O75533 1304 aaKnown RBP eCLIP19.8■□□□□ 0.761e-7■■■■■ 188.2
GMDS-AS1-206ENST00000530346 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.23■□□□□ 0.678e-7■■■■■ 124.2
GMDS-AS1-206ENST00000530346 AGGF1Q8N302 714 aaeCLIP17.53■□□□□ 0.44e-11■■■■■ 102.5
GMDS-AS1-206ENST00000530346 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.97■■□□□ 1.117e-8■■■■■ 72.9
GMDS-AS1-206ENST00000530346 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.04■□□□□ 0.643e-8■■■■■ 71.2
GMDS-AS1-206ENST00000530346 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.01■□□□□ 0.312e-6■■■■■ 62.9
GMDS-AS1-206ENST00000530346 HNRNPLP14866 589 aaKnown RBP eCLIP18.84■□□□□ 0.618e-8■■■■■ 54
GMDS-AS1-206ENST00000530346 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.82■□□□□ 0.62e-8■■■■■ 44.5
GMDS-AS1-206ENST00000530346 NIPBLQ6KC79 2804 aaeCLIP15.48■□□□□ 0.078e-8■■■■■ 41.9
GMDS-AS1-206ENST00000530346 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.28■□□□□ 0.044e-11■■■■■ 41.7
GMDS-AS1-206ENST00000530346 PTBP1P26599 531 aaKnown RBP eCLIP13.88□□□□□ -0.193e-7■■■■■ 39.7
GMDS-AS1-206ENST00000530346 TRA2AQ13595 282 aaKnown RBP eCLIP17.84■□□□□ 0.455e-9■■■■■ 39.6
GMDS-AS1-206ENST00000530346 DDX3XO00571 662 aaKnown RBP eCLIP18.58■□□□□ 0.561e-6■■■■■ 35.7
GMDS-AS1-206ENST00000530346 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.77■□□□□ 0.61e-6■■■■■ 34.3
GMDS-AS1-206ENST00000530346 XRCC6P12956 609 aaKnown RBP eCLIP20.25■□□□□ 0.836e-6■■■■■ 31.4
GMDS-AS1-206ENST00000530346 CDC40O60508 579 aaKnown RBP eCLIP16.65■□□□□ 0.263e-7■■■■■ 31.4
GMDS-AS1-206ENST00000530346 PABPC4Q13310 644 aaKnown RBP eCLIP21.78■■□□□ 1.083e-7■■■■■ 31.3
GMDS-AS1-206ENST00000530346 LARP4Q71RC2 724 aaKnown RBP eCLIP16.56■□□□□ 0.241e-6■■■■■ 31.2
GMDS-AS1-206ENST00000530346 DKC1O60832 514 aaKnown RBP eCLIP20.38■□□□□ 0.851e-6■■■■■ 30
GMDS-AS1-206ENST00000530346 GTF2F1P35269 517 aaKnown RBP eCLIP19.92■□□□□ 0.787e-7■■■■■ 29.3
GMDS-AS1-206ENST00000530346 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.11■□□□□ 0.011e-7■■■■■ 29.1
GMDS-AS1-206ENST00000530346 MATR3P43243 847 aaKnown RBP eCLIP19.78■□□□□ 0.763e-8■■■■■ 27.2
GMDS-AS1-206ENST00000530346 U2AF2P26368 475 aaKnown RBP eCLIP20.3■□□□□ 0.845e-6■■■■□ 25
GMDS-AS1-206ENST00000530346 NSUN2Q08J23 767 aaKnown RBP eCLIP18.35■□□□□ 0.531e-5■■■■□ 24.6
GMDS-AS1-206ENST00000530346 CSTF2P33240 577 aaKnown RBP eCLIP17.76■□□□□ 0.431e-6■■■■□ 24.2
GMDS-AS1-206ENST00000530346 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.32□□□□□ -0.124e-6■■■■□ 22.1
GMDS-AS1-206ENST00000530346 PCBP2Q15366 365 aaKnown RBP eCLIP17.06■□□□□ 0.327e-8■■■■□ 21.9
GMDS-AS1-206ENST00000530346 YBX3P16989 372 aaKnown RBP eCLIP23.74■■□□□ 1.397e-7■■■■□ 21.7
GMDS-AS1-206ENST00000530346 HNRNPMP52272 730 aaKnown RBP eCLIP28.54■■■□□ 2.161e-6■■■■□ 20.7
GMDS-AS1-206ENST00000530346 NCBP2P52298 156 aaKnown RBP eCLIP16.63■□□□□ 0.252e-8■■■■□ 20.4
GMDS-AS1-206ENST00000530346 RBFOX2O43251 390 aaKnown RBP eCLIP14.03□□□□□ -0.168e-6■■■■□ 20.3
GMDS-AS1-206ENST00000530346 KHSRPQ92945 711 aaKnown RBP eCLIP19.69■□□□□ 0.743e-6■■■■□ 20.1
GMDS-AS1-206ENST00000530346 ILF3Q12906 894 aaKnown RBP eCLIP18.01■□□□□ 0.473e-6■■■■□ 19.3
GMDS-AS1-206ENST00000530346 HLTFQ14527 1009 aaKnown RBP eCLIP17.97■□□□□ 0.471e-6■■■□□ 18.6
GMDS-AS1-206ENST00000530346 HNRNPCP07910 306 aaKnown RBP eCLIP13.42□□□□□ -0.269e-6■■■□□ 17.7
GMDS-AS1-206ENST00000530346 RBM22Q9NW64 420 aaKnown RBP eCLIP18.21■□□□□ 0.517e-8■■■□□ 17.4
GMDS-AS1-206ENST00000530346 PPIGQ13427 754 aaKnown RBP eCLIP20.75■□□□□ 0.915e-7■■■□□ 15.2
GMDS-AS1-206ENST00000530346 SAFB2Q14151 953 aaKnown RBP eCLIP26.12■■□□□ 1.775e-6■■■□□ 15.1
GMDS-AS1-206ENST00000530346 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.64■■□□□ 1.541e-8■■□□□ 13.4
GMDS-AS1-206ENST00000530346 TROVE2P10155 538 aaKnown RBP eCLIP16.14■□□□□ 0.173e-9■■□□□ 13.3
GMDS-AS1-206ENST00000530346 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.67■□□□□ 0.93e-6■■□□□ 13
GMDS-AS1-206ENST00000530346 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.33■■□□□ 1.651e-6■■□□□ 12.3
GMDS-AS1-206ENST00000530346 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.53■□□□□ 0.568e-9■■□□□ 11.8
GMDS-AS1-206ENST00000530346 QKIQ96PU8 341 aaKnown RBP eCLIP18.07■□□□□ 0.483e-6■□□□□ 10.7
GMDS-AS1-206ENST00000530346 EFTUD2Q15029 972 aaKnown RBP eCLIP17.16■□□□□ 0.347e-10■□□□□ 10.5
GMDS-AS1-206ENST00000530346 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.68■■■□□ 2.021e-6■□□□□ 10.3
GMDS-AS1-206ENST00000530346 ZC3H11AO75152 810 aaKnown RBP eCLIP19.97■□□□□ 0.792e-6■□□□□ 9.4
Retrieved 47 of 47 RNA–protein pairs in 29.2 ms