RNA: ENST00000528498.5

RDX-204, Transcript of radixin, humanhuman

TSL 1 (best) BASIC

Gene RDX, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-204ENST00000528498 TARDBPQ13148 414 aaKnown RBP eCLIP20.23■□□□□ 0.831e-45■■■■■ 53.8
RDX-204ENST00000528498 UPF1Q92900 1129 aaKnown RBP eCLIP24.72■■□□□ 1.552e-37■■□□□ 14.1
RDX-204ENST00000528498 EIF4G2P78344 907 aaKnown RBP eCLIP30.75■■■□□ 2.511e-35■■■■■ 36.1
RDX-204ENST00000528498 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.51■■□□□ 1.192e-13■■■■■ 37.8
RDX-204ENST00000528498 FXR2P51116 673 aaKnown RBP eCLIP24.51■■□□□ 1.511e-12■□□□□ 10.8
RDX-204ENST00000528498 SRSF7Q16629 238 aaKnown RBP eCLIP18.31■□□□□ 0.525e-12■■■■■ 38.5
RDX-204ENST00000528498 DDX3XO00571 662 aaKnown RBP eCLIP23.59■■□□□ 1.377e-9■■■□□ 18.1
RDX-204ENST00000528498 CPSF6Q16630 551 aaKnown RBP eCLIP21.23■□□□□ 0.994e-8■■■□□ 16.9
RDX-204ENST00000528498 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.07■■■□□ 2.566e-8■■■□□ 16.9
RDX-204ENST00000528498 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.09■■□□□ 1.457e-8■■■□□ 16
RDX-204ENST00000528498 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.02■■□□□ 1.127e-8■■□□□ 12.9
RDX-204ENST00000528498 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.9■■□□□ 1.11e-7■■■■■ 72
RDX-204ENST00000528498 DKC1O60832 514 aaKnown RBP eCLIP23.76■■□□□ 1.392e-7■■■□□ 15.9
RDX-204ENST00000528498 ZNF622Q969S3 477 aaKnown RBP eCLIP25.45■■□□□ 1.672e-7■■□□□ 13
RDX-204ENST00000528498 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.57■□□□□ 0.723e-7■■□□□ 11.5
RDX-204ENST00000528498 TRA2AQ13595 282 aaKnown RBP eCLIP19.81■□□□□ 0.763e-7■■■■□ 23.7
RDX-204ENST00000528498 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.93■■□□□ 1.744e-7■■□□□ 11.4
RDX-204ENST00000528498 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.34■■□□□ 1.974e-7■■■□□ 17.5
RDX-204ENST00000528498 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.72■■□□□ 1.396e-7■■□□□ 12.2
RDX-204ENST00000528498 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.28■□□□□ 0.367e-7■□□□□ 10.5
RDX-204ENST00000528498 FUBP3Q96I24 572 aaKnown RBP eCLIP22.42■■□□□ 1.188e-7■□□□□ 9.5
RDX-204ENST00000528498 PCBP2Q15366 365 aaKnown RBP eCLIP21.35■■□□□ 1.012e-6■■■■■ 28.2
RDX-204ENST00000528498 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.83■■□□□ 1.252e-6■□□□□ 10.8
RDX-204ENST00000528498 SF3B1O75533 1304 aaKnown RBP eCLIP22.43■■□□□ 1.182e-6■■■■■ 103.4
RDX-204ENST00000528498 KHSRPQ92945 711 aaKnown RBP eCLIP22.88■■□□□ 1.254e-6■■■□□ 17.7
RDX-204ENST00000528498 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.55■■□□□ 1.24e-6■■□□□ 12.4
RDX-204ENST00000528498 PUM1Q14671 1186 aaKnown RBP eCLIP20.48■□□□□ 0.875e-6■■■■■ 27.9
RDX-204ENST00000528498 U2AF1Q01081 240 aaKnown RBP eCLIP28.73■■■□□ 2.196e-6■■■■□ 22.1
RDX-204ENST00000528498 TIA1P31483 386 aaKnown RBP eCLIP20.89■□□□□ 0.941e-5■□□□□ 11
RDX-204ENST00000528498 AGGF1Q8N302 714 aaeCLIP22.5■■□□□ 1.191e-5■■■■□ 19.6
Retrieved 30 of 30 RNA–protein pairs in 29.2 ms