RNA: ENST00000527853.1

RPS25-204, Transcript of ribosomal protein S25, humanhuman

TSL 2

Gene RPS25, Length 1,462 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS25-204ENST00000527853 RBM22Q9NW64 420 aaKnown RBP eCLIP18.18■□□□□ 0.56e-13■■■■■ 75.1
RPS25-204ENST00000527853 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.66■□□□□ 0.261e-323■■■■■ 62.3
RPS25-204ENST00000527853 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.6■□□□□ 0.092e-11■■■■■ 37.6
RPS25-204ENST00000527853 KHSRPQ92945 711 aaKnown RBP eCLIP19.97■□□□□ 0.798e-11■■■■■ 33.8
RPS25-204ENST00000527853 EFTUD2Q15029 972 aaKnown RBP eCLIP17.22■□□□□ 0.351e-10■■■■■ 28.1
RPS25-204ENST00000527853 ILF3Q12906 894 aaKnown RBP eCLIP17.95■□□□□ 0.463e-8■■■■■ 28.1
RPS25-204ENST00000527853 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.52■□□□□ 0.889e-10■■■■□ 26
RPS25-204ENST00000527853 U2AF1Q01081 240 aaKnown RBP eCLIP24.28■■□□□ 1.483e-7■■■■□ 22.1
RPS25-204ENST00000527853 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.81■□□□□ 0.926e-8■■■■□ 21
RPS25-204ENST00000527853 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.6■□□□□ 0.413e-6■■■■□ 20.9
RPS25-204ENST00000527853 G3BP1Q13283 466 aaKnown RBP eCLIP22.41■■□□□ 1.182e-8■■■■□ 20.3
RPS25-204ENST00000527853 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.73■□□□□ 0.754e-12■■■■□ 20.3
RPS25-204ENST00000527853 RBM15Q96T37 977 aaKnown RBP eCLIP18.09■□□□□ 0.498e-20■■■■□ 19.5
RPS25-204ENST00000527853 SF3A3Q12874 501 aaKnown RBP eCLIP16.09■□□□□ 0.173e-6■■■□□ 19.2
RPS25-204ENST00000527853 PABPC4Q13310 644 aaKnown RBP eCLIP21.71■■□□□ 1.079e-20■■■□□ 17.6
RPS25-204ENST00000527853 SF3B4Q15427 424 aaKnown RBP eCLIP16.32■□□□□ 0.22e-9■■■□□ 17.6
RPS25-204ENST00000527853 U2AF2P26368 475 aaKnown RBP eCLIP20.26■□□□□ 0.831e-7■■■□□ 17
RPS25-204ENST00000527853 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.66■□□□□ 0.261e-23■■■□□ 16.9
RPS25-204ENST00000527853 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.63■■□□□ 1.539e-18■■■□□ 16.2
RPS25-204ENST00000527853 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.84■□□□□ 0.454e-8■■■□□ 16.1
RPS25-204ENST00000527853 NIPBLQ6KC79 2804 aaeCLIP15.92■□□□□ 0.142e-8■■■□□ 15.7
RPS25-204ENST00000527853 RBM5P52756 815 aaKnown RBP eCLIP22.49■■□□□ 1.195e-6■■■□□ 14.6
RPS25-204ENST00000527853 AQRO60306 1485 aaKnown RBP eCLIP32.23■■■□□ 2.754e-11■■□□□ 14.4
RPS25-204ENST00000527853 DDX3XO00571 662 aaKnown RBP eCLIP18.58■□□□□ 0.571e-323■■□□□ 13.9
RPS25-204ENST00000527853 SF3B1O75533 1304 aaKnown RBP eCLIP19.78■□□□□ 0.766e-10■■□□□ 13.8
RPS25-204ENST00000527853 AGGF1Q8N302 714 aaeCLIP17.61■□□□□ 0.412e-9■■□□□ 12.8
RPS25-204ENST00000527853 TRA2AQ13595 282 aaKnown RBP eCLIP17.75■□□□□ 0.439e-35■■□□□ 12.8
RPS25-204ENST00000527853 SUB1P53999 127 aaKnown RBP eCLIP13.48□□□□□ -0.252e-26■■□□□ 12.5
RPS25-204ENST00000527853 CDC40O60508 579 aaKnown RBP eCLIP16.67■□□□□ 0.264e-6■■□□□ 12.3
RPS25-204ENST00000527853 TIA1P31483 386 aaKnown RBP eCLIP16.69■□□□□ 0.262e-9■■□□□ 12.3
RPS25-204ENST00000527853 ZRANB2O95218 330 aaKnown RBP eCLIP18.07■□□□□ 0.483e-6■■□□□ 12.2
RPS25-204ENST00000527853 PUM1Q14671 1186 aaKnown RBP eCLIP18.69■□□□□ 0.581e-29■■□□□ 11.7
RPS25-204ENST00000527853 GPKOWQ92917 476 aaPredicted RBP eCLIP20.93■□□□□ 0.944e-7■□□□□ 10.8
RPS25-204ENST00000527853 LARP4Q71RC2 724 aaKnown RBP eCLIP16.52■□□□□ 0.232e-22■□□□□ 10.7
RPS25-204ENST00000527853 YBX3P16989 372 aaKnown RBP eCLIP24■■□□□ 1.437e-21■□□□□ 10.6
RPS25-204ENST00000527853 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.89■■■□□ 2.057e-28■□□□□ 10.6
RPS25-204ENST00000527853 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.4■□□□□ 0.542e-36■□□□□ 9.4
RPS25-204ENST00000527853 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.49■■■□□ 2.314e-59■□□□□ 8.8
RPS25-204ENST00000527853 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.07■□□□□ 0.322e-6■□□□□ 8.7
RPS25-204ENST00000527853 ZNF622Q969S3 477 aaKnown RBP eCLIP23.59■■□□□ 1.371e-323■□□□□ 8.2
Retrieved 40 of 40 RNA–protein pairs in 26.9 ms