RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.04■□□□□ -07e-22■■■■■ 89.9
CAPN1-206ENST00000526966 AATFQ9NY61 560 aaKnown RBP eCLIP23.03■■□□□ 1.286e-6■■■■■ 54.7
CAPN1-206ENST00000526966 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.76■□□□□ 0.752e-14■■■■■ 49.7
CAPN1-206ENST00000526966 METAP2P50579 478 aaKnown RBP eCLIP21.24■□□□□ 0.993e-8■■■■■ 34.2
CAPN1-206ENST00000526966 DDX3XO00571 662 aaKnown RBP eCLIP18.63■□□□□ 0.573e-11■■■■■ 33.2
CAPN1-206ENST00000526966 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.4■■■□□ 2.621e-9■■■■□ 24
CAPN1-206ENST00000526966 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.59■■□□□ 1.214e-8■■■■□ 22.5
CAPN1-206ENST00000526966 GTF2F1P35269 517 aaKnown RBP eCLIP21.41■■□□□ 1.024e-13■■■■□ 21.8
CAPN1-206ENST00000526966 AQRO60306 1485 aaKnown RBP eCLIP34.61■■■■□ 3.134e-7■■■■□ 19.3
CAPN1-206ENST00000526966 EFTUD2Q15029 972 aaKnown RBP eCLIP17.35■□□□□ 0.372e-6■■■□□ 18.3
CAPN1-206ENST00000526966 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.56■□□□□ 0.242e-10■■■□□ 18.1
CAPN1-206ENST00000526966 PRPF4O43172 522 aaKnown RBP eCLIP17.82■□□□□ 0.442e-6■■■□□ 17.7
CAPN1-206ENST00000526966 PPIGQ13427 754 aaKnown RBP eCLIP22.26■■□□□ 1.152e-6■■■□□ 17.2
CAPN1-206ENST00000526966 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.36■■■□□ 2.292e-6■■■□□ 14.7
CAPN1-206ENST00000526966 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.99■■□□□ 1.752e-6■■□□□ 11.9
CAPN1-206ENST00000526966 FMR1Q06787 632 aaKnown RBP eCLIP24.54■■□□□ 1.521e-6■□□□□ 10.5
CAPN1-206ENST00000526966 NCBP2P52298 156 aaKnown RBP eCLIP16.81■□□□□ 0.282e-8■□□□□ 10.4
CAPN1-206ENST00000526966 YBX3P16989 372 aaKnown RBP eCLIP26.01■■□□□ 1.753e-6■□□□□ 8.1
Retrieved 18 of 18 RNA–protein pairs in 12.6 ms