RNA: ENST00000525083.5

FOXRED1-203, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 2

Gene FOXRED1, Length 1,228 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-203ENST00000525083 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.17■□□□□ 0.54e-49■■■■■ 168.5
FOXRED1-203ENST00000525083 FTOQ9C0B1 505 aaKnown RBP eCLIP19.73■□□□□ 0.752e-6■■■■■ 157.3
FOXRED1-203ENST00000525083 EIF4G2P78344 907 aaKnown RBP eCLIP24.46■■□□□ 1.516e-10■■■■■ 152.6
FOXRED1-203ENST00000525083 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.73■□□□□ 0.593e-7■■■■■ 142.8
FOXRED1-203ENST00000525083 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.58■□□□□ 0.246e-7■■■■■ 139.2
FOXRED1-203ENST00000525083 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.71■□□□□ 0.599e-10■■■■■ 113.6
FOXRED1-203ENST00000525083 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.32■□□□□ 0.23e-8■■■■■ 94.4
FOXRED1-203ENST00000525083 EWSR1Q01844 656 aaKnown RBP eCLIP12.85□□□□□ -0.351e-8■■■■■ 83.9
FOXRED1-203ENST00000525083 AARSP49588 968 aaKnown RBP eCLIP18.89■□□□□ 0.612e-12■■■■■ 67
FOXRED1-203ENST00000525083 RBFOX2O43251 390 aaKnown RBP eCLIP13.6□□□□□ -0.231e-15■■■■■ 63.4
FOXRED1-203ENST00000525083 PCBP2Q15366 365 aaKnown RBP eCLIP16.54■□□□□ 0.241e-8■■■■■ 60.5
FOXRED1-203ENST00000525083 GTF2F1P35269 517 aaKnown RBP eCLIP19.14■□□□□ 0.652e-18■■■■■ 58.6
FOXRED1-203ENST00000525083 SF3A3Q12874 501 aaKnown RBP eCLIP15.85■□□□□ 0.133e-8■■■■■ 54.4
FOXRED1-203ENST00000525083 SF3B1O75533 1304 aaKnown RBP eCLIP19.03■□□□□ 0.642e-7■■■■■ 53.5
FOXRED1-203ENST00000525083 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.73□□□□□ -0.052e-29■■■■■ 45.4
FOXRED1-203ENST00000525083 ZRANB2O95218 330 aaKnown RBP eCLIP17.64■□□□□ 0.411e-6■■■■■ 42
FOXRED1-203ENST00000525083 AQRO60306 1485 aaKnown RBP eCLIP30.48■■■□□ 2.472e-10■■■■■ 41.8
FOXRED1-203ENST00000525083 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.39■□□□□ 0.854e-12■■■■■ 39.7
FOXRED1-203ENST00000525083 TIA1P31483 386 aaKnown RBP eCLIP16.26■□□□□ 0.192e-12■■■■■ 39.6
FOXRED1-203ENST00000525083 PRPF4O43172 522 aaKnown RBP eCLIP16.6■□□□□ 0.253e-7■■■■■ 39
FOXRED1-203ENST00000525083 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.76■□□□□ 0.913e-6■■■■■ 37.5
FOXRED1-203ENST00000525083 SRSF1Q07955 248 aaKnown RBP eCLIP16.12■□□□□ 0.175e-10■■■■■ 36.9
FOXRED1-203ENST00000525083 DKC1O60832 514 aaKnown RBP eCLIP19.6■□□□□ 0.734e-12■■■■■ 36.8
FOXRED1-203ENST00000525083 DDX21Q9NR30 783 aaKnown RBP eCLIP22.65■■□□□ 1.223e-6■■■■■ 35.5
FOXRED1-203ENST00000525083 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.15■□□□□ 0.53e-8■■■■■ 33.8
FOXRED1-203ENST00000525083 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.74□□□□□ -0.054e-8■■■■■ 27.5
FOXRED1-203ENST00000525083 HNRNPMP52272 730 aaKnown RBP eCLIP27.41■■□□□ 1.985e-9■■■■■ 27.4
FOXRED1-203ENST00000525083 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.33■□□□□ 0.366e-9■■■■■ 26.8
FOXRED1-203ENST00000525083 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.18■□□□□ 0.981e-6■■■■□ 24.6
FOXRED1-203ENST00000525083 SF3B4Q15427 424 aaKnown RBP eCLIP15.81■□□□□ 0.124e-6■■■■□ 23.4
FOXRED1-203ENST00000525083 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.92□□□□□ -0.183e-6■■■■□ 23.2
FOXRED1-203ENST00000525083 AATFQ9NY61 560 aaKnown RBP eCLIP21.28■■□□□ 15e-6■■■■□ 23
FOXRED1-203ENST00000525083 FUSP35637 526 aaKnown RBP eCLIP11.68□□□□□ -0.541e-7■■■■□ 22.5
FOXRED1-203ENST00000525083 CDC40O60508 579 aaKnown RBP eCLIP16.07■□□□□ 0.161e-6■■■■□ 21.3
FOXRED1-203ENST00000525083 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.97■□□□□ 0.631e-6■■■■□ 21.1
FOXRED1-203ENST00000525083 SMNDC1O75940 238 aaKnown RBP eCLIP15.66■□□□□ 0.16e-8■■■□□ 19.1
FOXRED1-203ENST00000525083 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.65■■□□□ 1.861e-6■■■□□ 16.9
FOXRED1-203ENST00000525083 YBX3P16989 372 aaKnown RBP eCLIP22.65■■□□□ 1.225e-6■■■□□ 16.2
FOXRED1-203ENST00000525083 EFTUD2Q15029 972 aaKnown RBP eCLIP16.81■□□□□ 0.282e-10■■■□□ 16
FOXRED1-203ENST00000525083 METAP2P50579 478 aaKnown RBP eCLIP20.22■□□□□ 0.832e-9■■■□□ 15.4
FOXRED1-203ENST00000525083 SRSF9Q13242 221 aaKnown RBP eCLIP10.74□□□□□ -0.692e-8■■■□□ 15
FOXRED1-203ENST00000525083 NCBP2P52298 156 aaKnown RBP eCLIP16.15■□□□□ 0.181e-10■■■□□ 14.8
FOXRED1-203ENST00000525083 PPIGQ13427 754 aaKnown RBP eCLIP19.81■□□□□ 0.767e-7■■□□□ 13.5
FOXRED1-203ENST00000525083 SAFB2Q14151 953 aaKnown RBP eCLIP25.2■■□□□ 1.621e-7■■□□□ 13.2
FOXRED1-203ENST00000525083 RPS3P23396 243 aaKnown RBP eCLIP17.04■□□□□ 0.321e-6■■□□□ 12.2
FOXRED1-203ENST00000525083 DDX3XO00571 662 aaKnown RBP eCLIP18.08■□□□□ 0.489e-12■■□□□ 11.6
FOXRED1-203ENST00000525083 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.78■□□□□ 0.761e-6■□□□□ 10.7
FOXRED1-203ENST00000525083 HNRNPUQ00839 825 aaKnown RBP eCLIP22.37■■□□□ 1.175e-6■□□□□ 10.2
FOXRED1-203ENST00000525083 U2AF2P26368 475 aaKnown RBP eCLIP19.67■□□□□ 0.742e-7■□□□□ 10
Retrieved 49 of 49 RNA–protein pairs in 41.6 ms