RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 PABPC4Q13310 644 aaKnown RBP eCLIP14.21□□□□□ -0.131e-323■■■■■ 52.7
PABPC1-219ENST00000522387 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.65□□□□□ -0.541e-323■□□□□ 8.9
PABPC1-219ENST00000522387 LARP4Q71RC2 724 aaKnown RBP eCLIP11.76□□□□□ -0.534e-78■■■□□ 15.4
PABPC1-219ENST00000522387 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.49□□□□□ -0.098e-72■■■□□ 14.8
PABPC1-219ENST00000522387 DDX6P26196 483 aaKnown RBP eCLIP12.76□□□□□ -0.375e-38■■□□□ 11.5
PABPC1-219ENST00000522387 YBX3P16989 372 aaKnown RBP eCLIP15.09■□□□□ 0.013e-36■□□□□ 10.8
PABPC1-219ENST00000522387 PCBP2Q15366 365 aaKnown RBP eCLIP11.92□□□□□ -0.58e-35■■■■■ 42
PABPC1-219ENST00000522387 PCBP1Q15365 356 aaKnown RBP eCLIP13.41□□□□□ -0.263e-28■■■□□ 17.7
PABPC1-219ENST00000522387 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.75□□□□□ -0.212e-24■■■■■ 27.3
PABPC1-219ENST00000522387 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.32□□□□□ -0.63e-23■■■□□ 15.5
PABPC1-219ENST00000522387 U2AF2P26368 475 aaKnown RBP eCLIP14.12□□□□□ -0.151e-22■□□□□ 11.3
PABPC1-219ENST00000522387 TIA1P31483 386 aaKnown RBP eCLIP11.7□□□□□ -0.549e-22■■■■□ 19.5
PABPC1-219ENST00000522387 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.39□□□□□ -0.432e-21■■■■■ 27.9
PABPC1-219ENST00000522387 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.14■□□□□ 0.186e-20■□□□□ 10.8
PABPC1-219ENST00000522387 PTBP1P26599 531 aaKnown RBP eCLIP10.73□□□□□ -0.696e-18■□□□□ 8
PABPC1-219ENST00000522387 FMR1Q06787 632 aaKnown RBP eCLIP14.67□□□□□ -0.067e-17■■■■■ 61.9
PABPC1-219ENST00000522387 SF3B4Q15427 424 aaKnown RBP eCLIP11□□□□□ -0.653e-16■■■■■ 30.3
PABPC1-219ENST00000522387 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.02□□□□□ -0.322e-14■■■□□ 16.1
PABPC1-219ENST00000522387 TARDBPQ13148 414 aaKnown RBP eCLIP11.76□□□□□ -0.534e-13■■■■□ 24.9
PABPC1-219ENST00000522387 RBM5P52756 815 aaKnown RBP eCLIP14.92□□□□□ -0.022e-12■■■■□ 23.8
PABPC1-219ENST00000522387 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.48□□□□□ -0.254e-12■□□□□ 10.7
PABPC1-219ENST00000522387 SUB1P53999 127 aaKnown RBP eCLIP9.62□□□□□ -0.871e-11■□□□□ 9.5
PABPC1-219ENST00000522387 TIAL1Q01085 375 aaKnown RBP eCLIP12.17□□□□□ -0.461e-11■■■■□ 19.5
PABPC1-219ENST00000522387 RBFOX2O43251 390 aaKnown RBP eCLIP9.83□□□□□ -0.843e-11■■□□□ 11.8
PABPC1-219ENST00000522387 G3BP1Q13283 466 aaKnown RBP eCLIP15.31■□□□□ 0.044e-11■■□□□ 14
PABPC1-219ENST00000522387 EFTUD2Q15029 972 aaKnown RBP eCLIP12.36□□□□□ -0.437e-11■■■□□ 17.5
PABPC1-219ENST00000522387 METAP2P50579 478 aaKnown RBP eCLIP14.44□□□□□ -0.18e-11■■■□□ 16.6
PABPC1-219ENST00000522387 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.43□□□□□ -0.264e-10■■■■□ 20.7
PABPC1-219ENST00000522387 PRPF4O43172 522 aaKnown RBP eCLIP12.11□□□□□ -0.474e-10■■□□□ 13.4
PABPC1-219ENST00000522387 KHSRPQ92945 711 aaKnown RBP eCLIP12.95□□□□□ -0.345e-10■■□□□ 13.6
PABPC1-219ENST00000522387 NOLC1Q14978 699 aaKnown RBP eCLIP13.67□□□□□ -0.229e-10■■■■□ 20.6
PABPC1-219ENST00000522387 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.33□□□□□ -0.442e-9■■■■□ 20.1
PABPC1-219ENST00000522387 IGF2BP3O00425 579 aaKnown RBP eCLIP14.27□□□□□ -0.123e-9■■■■■ 37.6
PABPC1-219ENST00000522387 SF3A3Q12874 501 aaKnown RBP eCLIP12.37□□□□□ -0.434e-9■■■■■ 29.3
PABPC1-219ENST00000522387 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.1□□□□□ -0.635e-9■□□□□ 10.3
PABPC1-219ENST00000522387 RBM22Q9NW64 420 aaKnown RBP eCLIP12.6□□□□□ -0.396e-9■■■■□ 19.7
PABPC1-219ENST00000522387 NIPBLQ6KC79 2804 aaeCLIP10.15□□□□□ -0.781e-8■□□□□ 9.7
PABPC1-219ENST00000522387 AKAP1Q92667 903 aaKnown RBP eCLIP10.7□□□□□ -0.72e-8■■□□□ 12.3
PABPC1-219ENST00000522387 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.39□□□□□ -0.272e-8■□□□□ 9.6
PABPC1-219ENST00000522387 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.33□□□□□ -0.63e-8■□□□□ 8.7
PABPC1-219ENST00000522387 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.94■□□□□ 0.627e-8■□□□□ 10.3
PABPC1-219ENST00000522387 SMNDC1O75940 238 aaKnown RBP eCLIP12.04□□□□□ -0.488e-8■■■■■ 27.3
PABPC1-219ENST00000522387 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.59■□□□□ 0.579e-8■□□□□ 8.7
PABPC1-219ENST00000522387 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.79□□□□□ -0.22e-7■■■□□ 16.8
PABPC1-219ENST00000522387 CSTF2P33240 577 aaKnown RBP eCLIP11.78□□□□□ -0.523e-7■□□□□ 8.4
PABPC1-219ENST00000522387 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.22□□□□□ -0.453e-7■□□□□ 8.8
PABPC1-219ENST00000522387 HNRNPCP07910 306 aaKnown RBP eCLIP11.39□□□□□ -0.595e-7■■■□□ 15.3
PABPC1-219ENST00000522387 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.23□□□□□ -0.778e-7■■■■□ 25.6
PABPC1-219ENST00000522387 AQRO60306 1485 aaKnown RBP eCLIP20.49■□□□□ 0.871e-6■■■■■ 29.3
PABPC1-219ENST00000522387 PPIGQ13427 754 aaKnown RBP eCLIP13.35□□□□□ -0.271e-6■□□□□ 8.6
PABPC1-219ENST00000522387 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.51□□□□□ -0.412e-6■■■■■ 54.4
PABPC1-219ENST00000522387 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.89□□□□□ -0.352e-6■■■□□ 15.6
PABPC1-219ENST00000522387 NONOQ15233 471 aaKnown RBP eCLIP14.1□□□□□ -0.152e-6■■■□□ 15.9
PABPC1-219ENST00000522387 HLTFQ14527 1009 aaKnown RBP eCLIP12.62□□□□□ -0.392e-6■■■□□ 16.6
PABPC1-219ENST00000522387 SF3B1O75533 1304 aaKnown RBP eCLIP13.19□□□□□ -0.36e-6■■■■■ 43.4
Retrieved 55 of 55 RNA–protein pairs in 35.1 ms