RNA: ENST00000520002.5

CSMD1-206, Transcript of CUB and Sushi multiple domains 1, humanhuman


Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-206ENST00000520002 QKIQ96PU8 341 aaKnown RBP eCLIP9.09□□□□□ -0.957e-33■■■■■ 356
CSMD1-206ENST00000520002 SF3B1O75533 1304 aaKnown RBP eCLIP8.78□□□□□ -11e-7■■■■■ 172.3
CSMD1-206ENST00000520002 AGGF1Q8N302 714 aaeCLIP9.25□□□□□ -0.932e-8■■■■■ 37.2
CSMD1-206ENST00000520002 DKC1O60832 514 aaKnown RBP eCLIP9.5□□□□□ -0.892e-6■■■■■ 36
CSMD1-206ENST00000520002 AQRO60306 1485 aaKnown RBP eCLIP10.09□□□□□ -0.793e-7■■■■■ 34.7
CSMD1-206ENST00000520002 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.16□□□□□ -0.782e-6■■■■■ 29.1
CSMD1-206ENST00000520002 HNRNPLP14866 589 aaKnown RBP eCLIP8.69□□□□□ -1.022e-7■■■■□ 19.3
CSMD1-206ENST00000520002 PTBP1P26599 531 aaKnown RBP eCLIP8.1□□□□□ -1.112e-7■■■□□ 17
CSMD1-206ENST00000520002 SF3B4Q15427 424 aaKnown RBP eCLIP8.39□□□□□ -1.076e-6■■□□□ 11.8
CSMD1-206ENST00000520002 ZNF622Q969S3 477 aaKnown RBP eCLIP9.86□□□□□ -0.836e-7■■□□□ 11.7
CSMD1-206ENST00000520002 YBX3P16989 372 aaKnown RBP eCLIP8.71□□□□□ -1.024e-6■□□□□ 11.2
CSMD1-206ENST00000520002 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.19□□□□□ -0.941e-7■□□□□ 9.3
Retrieved 12 of 12 RNA–protein pairs in 11.7 ms