RNA: ENST00000519632.5

SHPRH-207, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 5,245 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-207ENST00000519632 QKIQ96PU8 341 aaKnown RBP eCLIP12.53□□□□□ -0.42e-37■■■■■ 280.4
SHPRH-207ENST00000519632 AQRO60306 1485 aaKnown RBP eCLIP14.21□□□□□ -0.135e-10■■■■■ 39.2
SHPRH-207ENST00000519632 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.88□□□□□ -0.193e-9■■■■■ 73.7
SHPRH-207ENST00000519632 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.02□□□□□ -0.162e-8■■■□□ 15.3
SHPRH-207ENST00000519632 GPKOWQ92917 476 aaPredicted RBP eCLIP13.18□□□□□ -0.32e-8■■■■■ 52.2
SHPRH-207ENST00000519632 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.88□□□□□ -0.353e-7■■■□□ 18.7
SHPRH-207ENST00000519632 SF3B4Q15427 424 aaKnown RBP eCLIP11.98□□□□□ -0.495e-7■■□□□ 13.9
SHPRH-207ENST00000519632 ZNF622Q969S3 477 aaKnown RBP eCLIP13.98□□□□□ -0.175e-7■□□□□ 11.3
SHPRH-207ENST00000519632 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.04□□□□□ -0.165e-7■■■■□ 19.8
SHPRH-207ENST00000519632 U2AF2P26368 475 aaKnown RBP eCLIP14.35□□□□□ -0.116e-7■■■■□ 20
SHPRH-207ENST00000519632 PPIGQ13427 754 aaKnown RBP eCLIP11.83□□□□□ -0.526e-7■■■□□ 16.3
SHPRH-207ENST00000519632 EIF3HO15372 352 aaKnown RBP eCLIP13.43□□□□□ -0.267e-7■■■□□ 17.6
SHPRH-207ENST00000519632 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.2□□□□□ -0.948e-7■■■□□ 18.9
SHPRH-207ENST00000519632 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.5■□□□□ 0.071e-6■■□□□ 11.9
SHPRH-207ENST00000519632 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.2□□□□□ -0.32e-6■■■□□ 16.4
SHPRH-207ENST00000519632 HLTFQ14527 1009 aaKnown RBP eCLIP14.08□□□□□ -0.153e-6■■□□□ 13
SHPRH-207ENST00000519632 KHSRPQ92945 711 aaKnown RBP eCLIP11.43□□□□□ -0.584e-6■■□□□ 13.7
SHPRH-207ENST00000519632 SF3B1O75533 1304 aaKnown RBP eCLIP12.3□□□□□ -0.446e-6■■■■■ 103.4
SHPRH-207ENST00000519632 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.88□□□□□ -0.356e-6■■■■■ 38.2
SHPRH-207ENST00000519632 ZRANB2O95218 330 aaKnown RBP eCLIP13.21□□□□□ -0.297e-6■■■■■ 37.3
Retrieved 20 of 20 RNA–protein pairs in 14.9 ms