RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.43□□□□□ -0.93e-13■■■■■ 52.2
PVT1-208ENST00000519481 RBFOX2O43251 390 aaKnown RBP eCLIP8.2□□□□□ -1.12e-12■■■■□ 22
PVT1-208ENST00000519481 EIF3HO15372 352 aaKnown RBP eCLIP10.12□□□□□ -0.793e-12■■■■■ 53.6
PVT1-208ENST00000519481 PRPF4O43172 522 aaKnown RBP eCLIP10.4□□□□□ -0.744e-11■■□□□ 11.7
PVT1-208ENST00000519481 NOLC1Q14978 699 aaKnown RBP eCLIP11.89□□□□□ -0.516e-11■■■■□ 21.2
PVT1-208ENST00000519481 U2AF2P26368 475 aaKnown RBP eCLIP11.95□□□□□ -0.51e-10■■■□□ 17.9
PVT1-208ENST00000519481 SF3B4Q15427 424 aaKnown RBP eCLIP10.01□□□□□ -0.812e-9■■■□□ 17.6
PVT1-208ENST00000519481 MATR3P43243 847 aaKnown RBP eCLIP11.9□□□□□ -0.57e-9■■■□□ 18.1
PVT1-208ENST00000519481 RBM15Q96T37 977 aaKnown RBP eCLIP10.93□□□□□ -0.661e-8■■■■□ 24.6
PVT1-208ENST00000519481 DKC1O60832 514 aaKnown RBP eCLIP12.23□□□□□ -0.452e-8■■■□□ 18.6
PVT1-208ENST00000519481 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.98□□□□□ -0.492e-8■■□□□ 12.1
PVT1-208ENST00000519481 PTBP1P26599 531 aaKnown RBP eCLIP8.16□□□□□ -1.15e-8■■■■■ 45.1
PVT1-208ENST00000519481 EIF4G2P78344 907 aaKnown RBP eCLIP15□□□□□ -0.016e-8■■■■□ 19.3
PVT1-208ENST00000519481 HNRNPLP14866 589 aaKnown RBP eCLIP11.45□□□□□ -0.587e-8■■□□□ 13
PVT1-208ENST00000519481 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.75□□□□□ -0.378e-8■■■□□ 15.3
PVT1-208ENST00000519481 ZNF622Q969S3 477 aaKnown RBP eCLIP14.44□□□□□ -0.12e-7■■■■□ 24.3
PVT1-208ENST00000519481 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.34□□□□□ -0.752e-7■□□□□ 9.8
PVT1-208ENST00000519481 EIF3DO15371 548 aaKnown RBP eCLIP11.65□□□□□ -0.543e-7■■■■□ 25.7
PVT1-208ENST00000519481 AQRO60306 1485 aaKnown RBP eCLIP19.63■□□□□ 0.733e-7■■□□□ 11.6
PVT1-208ENST00000519481 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.81□□□□□ -0.683e-7■■■■□ 23
PVT1-208ENST00000519481 CSTF2P33240 577 aaKnown RBP eCLIP10.83□□□□□ -0.683e-7■■□□□ 13.6
PVT1-208ENST00000519481 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.35□□□□□ -0.274e-7■■■■□ 24.3
PVT1-208ENST00000519481 TRA2AQ13595 282 aaKnown RBP eCLIP10.83□□□□□ -0.685e-7■■■■□ 26.4
PVT1-208ENST00000519481 HLTFQ14527 1009 aaKnown RBP eCLIP10.87□□□□□ -0.675e-7■■■□□ 16.8
PVT1-208ENST00000519481 PPIGQ13427 754 aaKnown RBP eCLIP12.79□□□□□ -0.366e-7■■□□□ 13.4
PVT1-208ENST00000519481 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.94□□□□□ -0.027e-7■■■□□ 16.1
PVT1-208ENST00000519481 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.89■□□□□ 0.298e-7■■■■□ 19.8
PVT1-208ENST00000519481 AGGF1Q8N302 714 aaeCLIP10.25□□□□□ -0.778e-7■■■■□ 20.8
PVT1-208ENST00000519481 RBM22Q9NW64 420 aaKnown RBP eCLIP10.83□□□□□ -0.689e-7■■■□□ 15.2
PVT1-208ENST00000519481 NONOQ15233 471 aaKnown RBP eCLIP12.24□□□□□ -0.459e-7■■■■□ 23.6
PVT1-208ENST00000519481 HNRNPKP61978 463 aaKnown RBP eCLIP11.08□□□□□ -0.641e-6■■□□□ 11.6
PVT1-208ENST00000519481 HNRNPMP52272 730 aaKnown RBP eCLIP17.41■□□□□ 0.381e-6■■■■□ 21.5
PVT1-208ENST00000519481 QKIQ96PU8 341 aaKnown RBP eCLIP10.65□□□□□ -0.71e-6■■■■□ 23.4
PVT1-208ENST00000519481 PCBP2Q15366 365 aaKnown RBP eCLIP10.02□□□□□ -0.811e-6■■□□□ 11.6
PVT1-208ENST00000519481 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.37■□□□□ 0.051e-6■□□□□ 11.1
PVT1-208ENST00000519481 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.49□□□□□ -0.571e-6■■■■■ 85.4
PVT1-208ENST00000519481 NIPBLQ6KC79 2804 aaeCLIP9.82□□□□□ -0.842e-6■■■■□ 25.1
PVT1-208ENST00000519481 TARDBPQ13148 414 aaKnown RBP eCLIP11.1□□□□□ -0.632e-6■■■■□ 21.7
PVT1-208ENST00000519481 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.73□□□□□ -0.853e-6■■■■■ 50.8
PVT1-208ENST00000519481 FMR1Q06787 632 aaKnown RBP eCLIP13.97□□□□□ -0.173e-6■■■■■ 44.3
PVT1-208ENST00000519481 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.45□□□□□ -0.583e-6■■■■□ 22.1
PVT1-208ENST00000519481 SFPQP23246 707 aaKnown RBP eCLIP12.21□□□□□ -0.453e-6■■□□□ 12.3
PVT1-208ENST00000519481 GTF2F1P35269 517 aaKnown RBP eCLIP12.25□□□□□ -0.453e-6■■□□□ 13.2
PVT1-208ENST00000519481 HNRNPCP07910 306 aaKnown RBP eCLIP7.93□□□□□ -1.143e-6■■□□□ 11.8
PVT1-208ENST00000519481 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.18□□□□□ -0.35e-6■■□□□ 11.7
PVT1-208ENST00000519481 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.29□□□□□ -0.767e-6■□□□□ 11.3
PVT1-208ENST00000519481 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.56□□□□□ -0.729e-6■■□□□ 12.4
PVT1-208ENST00000519481 TIA1P31483 386 aaKnown RBP eCLIP9.88□□□□□ -0.831e-5■□□□□ 11
Retrieved 48 of 48 RNA–protein pairs in 26.6 ms