RNA: ENST00000518074.5

SPIDR-206, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 2,819 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-206ENST00000518074 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.23□□□□□ -0.456e-7■■■■■ 229.9
SPIDR-206ENST00000518074 SF3B1O75533 1304 aaKnown RBP eCLIP11.35□□□□□ -0.598e-7■■■■■ 141.1
SPIDR-206ENST00000518074 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.5□□□□□ -0.577e-7■■■■■ 70.8
SPIDR-206ENST00000518074 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.67□□□□□ -0.72e-7■■■■■ 62.8
SPIDR-206ENST00000518074 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.31□□□□□ -0.925e-7■■■■■ 41.3
SPIDR-206ENST00000518074 FMR1Q06787 632 aaKnown RBP eCLIP12.96□□□□□ -0.341e-11■■■■■ 41.2
SPIDR-206ENST00000518074 LARP4Q71RC2 724 aaKnown RBP eCLIP10.73□□□□□ -0.692e-6■■■■■ 38.7
SPIDR-206ENST00000518074 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.46□□□□□ -0.574e-7■■■■■ 38.1
SPIDR-206ENST00000518074 QKIQ96PU8 341 aaKnown RBP eCLIP11.14□□□□□ -0.637e-9■■■■■ 36.4
SPIDR-206ENST00000518074 SF3A3Q12874 501 aaKnown RBP eCLIP11.57□□□□□ -0.569e-19■■■■■ 36
SPIDR-206ENST00000518074 PTBP1P26599 531 aaKnown RBP eCLIP9.91□□□□□ -0.824e-17■■■■■ 34
SPIDR-206ENST00000518074 PRPF4O43172 522 aaKnown RBP eCLIP11.19□□□□□ -0.621e-8■■■■■ 32.2
SPIDR-206ENST00000518074 NIPBLQ6KC79 2804 aaeCLIP8.84□□□□□ -0.995e-6■■■■■ 32.2
SPIDR-206ENST00000518074 PCBP2Q15366 365 aaKnown RBP eCLIP10.59□□□□□ -0.719e-7■■■■■ 31
SPIDR-206ENST00000518074 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.76□□□□□ -1.019e-7■■■■■ 29.4
SPIDR-206ENST00000518074 HNRNPLP14866 589 aaKnown RBP eCLIP10.93□□□□□ -0.661e-8■■■■■ 28.9
SPIDR-206ENST00000518074 MATR3P43243 847 aaKnown RBP eCLIP11.94□□□□□ -0.52e-6■■■■■ 27.8
SPIDR-206ENST00000518074 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.34□□□□□ -0.597e-6■■■■■ 27.7
SPIDR-206ENST00000518074 GTF2F1P35269 517 aaKnown RBP eCLIP12.26□□□□□ -0.452e-13■■■■□ 26.1
SPIDR-206ENST00000518074 HNRNPMP52272 730 aaKnown RBP eCLIP16.37■□□□□ 0.213e-6■■■■□ 25.9
SPIDR-206ENST00000518074 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.15□□□□□ -0.472e-6■■■■□ 25.9
SPIDR-206ENST00000518074 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.31□□□□□ -0.761e-6■■■■□ 23.9
SPIDR-206ENST00000518074 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.71□□□□□ -0.371e-6■■■■□ 22.4
SPIDR-206ENST00000518074 SAFB2Q14151 953 aaKnown RBP eCLIP14.91□□□□□ -0.022e-6■■■■□ 22
SPIDR-206ENST00000518074 CSTF2P33240 577 aaKnown RBP eCLIP10.47□□□□□ -0.731e-11■■■■□ 21.8
SPIDR-206ENST00000518074 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.18□□□□□ -0.147e-7■■■■□ 21.8
SPIDR-206ENST00000518074 ILF3Q12906 894 aaKnown RBP eCLIP10.29□□□□□ -0.762e-6■■■■□ 21.1
SPIDR-206ENST00000518074 KHSRPQ92945 711 aaKnown RBP eCLIP11.35□□□□□ -0.597e-14■■■■□ 21.1
SPIDR-206ENST00000518074 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.26□□□□□ -0.617e-6■■■■□ 20.5
SPIDR-206ENST00000518074 EIF4G2P78344 907 aaKnown RBP eCLIP15.16■□□□□ 0.023e-6■■■□□ 18.8
SPIDR-206ENST00000518074 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.47□□□□□ -0.093e-6■■■□□ 16.7
SPIDR-206ENST00000518074 SUB1P53999 127 aaKnown RBP eCLIP8.69□□□□□ -1.023e-6■■■□□ 16.6
SPIDR-206ENST00000518074 PPIGQ13427 754 aaKnown RBP eCLIP11.97□□□□□ -0.498e-7■■■□□ 16.5
SPIDR-206ENST00000518074 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.83■□□□□ 0.133e-6■■■□□ 15.2
SPIDR-206ENST00000518074 SF3B4Q15427 424 aaKnown RBP eCLIP10.37□□□□□ -0.755e-7■■□□□ 13.2
SPIDR-206ENST00000518074 AGGF1Q8N302 714 aaeCLIP11.22□□□□□ -0.612e-6■■□□□ 12.5
SPIDR-206ENST00000518074 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.89□□□□□ -0.511e-7■■□□□ 11.5
SPIDR-206ENST00000518074 SMNDC1O75940 238 aaKnown RBP eCLIP10.85□□□□□ -0.675e-8■□□□□ 11.3
SPIDR-206ENST00000518074 EIF3HO15372 352 aaKnown RBP eCLIP11.54□□□□□ -0.563e-7■□□□□ 10.4
SPIDR-206ENST00000518074 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.88□□□□□ -0.835e-6■□□□□ 9.7
SPIDR-206ENST00000518074 ZNF622Q969S3 477 aaKnown RBP eCLIP13.46□□□□□ -0.252e-7■□□□□ 8.8
SPIDR-206ENST00000518074 HLTFQ14527 1009 aaKnown RBP eCLIP11.73□□□□□ -0.532e-7■□□□□ 8.5
Retrieved 42 of 42 RNA–protein pairs in 19.4 ms