RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.46□□□□□ -1.75e-46■■□□□ 14
SKP1-203ENST00000517625 PABPC4Q13310 644 aaKnown RBP eCLIP4.42□□□□□ -1.78e-43■■□□□ 12.4
SKP1-203ENST00000517625 ZNF622Q969S3 477 aaKnown RBP eCLIP2.97□□□□□ -1.932e-20■□□□□ 9.4
SKP1-203ENST00000517625 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.86□□□□□ -1.951e-16■■□□□ 11.8
SKP1-203ENST00000517625 SUB1P53999 127 aaKnown RBP eCLIP1.92□□□□□ -2.13e-16■■■■■ 72.7
SKP1-203ENST00000517625 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.98□□□□□ -1.775e-16■□□□□ 9.1
SKP1-203ENST00000517625 RBFOX2O43251 390 aaKnown RBP eCLIP1.75□□□□□ -2.132e-14■■■■■ 49.8
SKP1-203ENST00000517625 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.06□□□□□ -2.425e-13■■□□□ 11.4
SKP1-203ENST00000517625 YBX3P16989 372 aaKnown RBP eCLIP4.26□□□□□ -1.731e-12■■□□□ 14.1
SKP1-203ENST00000517625 SND1Q7KZF4 910 aaKnown RBP eCLIP5.48□□□□□ -1.532e-12■■□□□ 11.8
SKP1-203ENST00000517625 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.32□□□□□ -1.883e-12■■■■□ 26.6
SKP1-203ENST00000517625 HNRNPMP52272 730 aaKnown RBP eCLIP3.6□□□□□ -1.831e-11■■■■□ 25
SKP1-203ENST00000517625 RPS3P23396 243 aaKnown RBP eCLIP0.24□□□□□ -2.372e-11■■□□□ 12.7
SKP1-203ENST00000517625 WRNQ14191 1432 aaPredicted RBP eCLIP0.71□□□□□ -2.33e-11■■■□□ 19.1
SKP1-203ENST00000517625 PUM1Q14671 1186 aaKnown RBP eCLIP3.62□□□□□ -1.831e-10■■□□□ 11.7
SKP1-203ENST00000517625 U2AF2P26368 475 aaKnown RBP eCLIP1.72□□□□□ -2.131e-9■■■■□ 21.1
SKP1-203ENST00000517625 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.93□□□□□ -1.943e-9■■□□□ 12.3
SKP1-203ENST00000517625 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.28□□□□□ -1.243e-9■■□□□ 13.9
SKP1-203ENST00000517625 EFTUD2Q15029 972 aaKnown RBP eCLIP2.68□□□□□ -1.986e-9■■■□□ 18.4
SKP1-203ENST00000517625 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.23□□□□□ -2.217e-9■■■■■ 72.6
SKP1-203ENST00000517625 HNRNPLP14866 589 aaKnown RBP eCLIP4□□□□□ -1.778e-9■□□□□ 9.2
SKP1-203ENST00000517625 QKIQ96PU8 341 aaKnown RBP eCLIP1.41□□□□□ -2.181e-8■■■■■ 29.1
SKP1-203ENST00000517625 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.74□□□□□ -2.131e-8■■■□□ 18.6
SKP1-203ENST00000517625 TIA1P31483 386 aaKnown RBP eCLIP2.71□□□□□ -1.982e-8■■■■□ 23.8
SKP1-203ENST00000517625 MATR3P43243 847 aaKnown RBP eCLIP2.92□□□□□ -1.946e-8■■■■□ 26.1
SKP1-203ENST00000517625 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.53□□□□□ -1.527e-8■■■■■ 40
SKP1-203ENST00000517625 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.38□□□□□ -0.919e-8■■■□□ 17.3
SKP1-203ENST00000517625 NKRFO15226 690 aaKnown RBP eCLIP4.29□□□□□ -1.721e-7■□□□□ 8.2
SKP1-203ENST00000517625 KHSRPQ92945 711 aaKnown RBP eCLIP6.69□□□□□ -1.342e-7■■■□□ 16.3
SKP1-203ENST00000517625 NONOQ15233 471 aaKnown RBP eCLIP2.68□□□□□ -1.983e-7■■■□□ 16.4
SKP1-203ENST00000517625 SF3B4Q15427 424 aaKnown RBP eCLIP2.97□□□□□ -1.937e-7■■■■□ 21.6
SKP1-203ENST00000517625 U2AF1Q01081 240 aaKnown RBP eCLIP4.07□□□□□ -1.769e-7■■■■□ 24.3
SKP1-203ENST00000517625 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.38□□□□□ -2.031e-6■□□□□ 9.4
SKP1-203ENST00000517625 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.36□□□□□ -2.031e-6■■□□□ 12.9
SKP1-203ENST00000517625 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.98□□□□□ -1.932e-6■□□□□ 8.4
SKP1-203ENST00000517625 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.26□□□□□ -1.892e-6■■■□□ 18.1
SKP1-203ENST00000517625 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.59□□□□□ -1.512e-6■■■■■ 36.6
SKP1-203ENST00000517625 LARP4Q71RC2 724 aaKnown RBP eCLIP4.03□□□□□ -1.763e-6■□□□□ 10.8
SKP1-203ENST00000517625 AQRO60306 1485 aaKnown RBP eCLIP1.5□□□□□ -2.173e-6■■□□□ 13.8
SKP1-203ENST00000517625 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.62□□□□□ -2.313e-6■□□□□ 10.9
SKP1-203ENST00000517625 AARSP49588 968 aaKnown RBP eCLIP3.45□□□□□ -1.864e-6■■■■□ 24
Retrieved 41 of 41 RNA–protein pairs in 21.6 ms