RNA: ENST00000508416.1

SKI-204, Transcript of SKI proto-oncogene, humanhuman

TSL 3

Gene SKI, Length 252 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-204ENST00000508416 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.32□□□□□ -0.64e-7■■■■■ 128.6
SKI-204ENST00000508416 SF3B1O75533 1304 aaKnown RBP eCLIP11.43□□□□□ -0.583e-6■■■■■ 111.9
SKI-204ENST00000508416 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.03□□□□□ -0.87e-8■■■■■ 87
SKI-204ENST00000508416 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.2□□□□□ -0.783e-7■■■■■ 62.1
SKI-204ENST00000508416 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.69□□□□□ -0.382e-7■■■■■ 56.4
SKI-204ENST00000508416 PTBP1P26599 531 aaKnown RBP eCLIP8.32□□□□□ -1.083e-7■■■■■ 49.5
SKI-204ENST00000508416 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.51□□□□□ -0.571e-6■■■■■ 41.2
SKI-204ENST00000508416 PCBP2Q15366 365 aaKnown RBP eCLIP10.07□□□□□ -0.82e-6■■■■■ 39
SKI-204ENST00000508416 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.65□□□□□ -0.864e-6■■■■■ 38.9
SKI-204ENST00000508416 DDX6P26196 483 aaKnown RBP eCLIP11.14□□□□□ -0.635e-7■■■■■ 38.6
SKI-204ENST00000508416 XRCC6P12956 609 aaKnown RBP eCLIP11.8□□□□□ -0.525e-9■■■■■ 37.3
SKI-204ENST00000508416 SF3B4Q15427 424 aaKnown RBP eCLIP9.54□□□□□ -0.882e-9■■■■■ 34.4
SKI-204ENST00000508416 CDC40O60508 579 aaKnown RBP eCLIP9.65□□□□□ -0.865e-7■■■■■ 34.4
SKI-204ENST00000508416 WRNQ14191 1432 aaPredicted RBP eCLIP18.26■□□□□ 0.513e-6■■■■■ 34.1
SKI-204ENST00000508416 LARP4Q71RC2 724 aaKnown RBP eCLIP9.81□□□□□ -0.842e-6■■■■■ 32.5
SKI-204ENST00000508416 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.25□□□□□ -0.452e-6■■■■■ 29.4
SKI-204ENST00000508416 YWHAGP61981 247 aaKnown RBP eCLIP11.09□□□□□ -0.636e-7■■■■■ 28.9
SKI-204ENST00000508416 MATR3P43243 847 aaKnown RBP eCLIP11.57□□□□□ -0.561e-6■■■■■ 28.3
SKI-204ENST00000508416 EWSR1Q01844 656 aaKnown RBP eCLIP7.89□□□□□ -1.153e-7■■■■■ 27.1
SKI-204ENST00000508416 AARSP49588 968 aaKnown RBP eCLIP11.39□□□□□ -0.593e-6■■■■■ 27.1
SKI-204ENST00000508416 TARDBPQ13148 414 aaKnown RBP eCLIP10.32□□□□□ -0.765e-7■■■■□ 26.6
SKI-204ENST00000508416 HNRNPMP52272 730 aaKnown RBP eCLIP16.41■□□□□ 0.224e-7■■■■□ 26.3
SKI-204ENST00000508416 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.05□□□□□ -0.641e-6■■■■□ 25.1
SKI-204ENST00000508416 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.53□□□□□ -0.43e-6■■■■□ 24.5
SKI-204ENST00000508416 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.97■□□□□ 0.155e-7■■■■□ 24.3
SKI-204ENST00000508416 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.98□□□□□ -0.658e-7■■■■□ 24
SKI-204ENST00000508416 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.4□□□□□ -0.745e-6■■■■□ 23.9
SKI-204ENST00000508416 GTF2F1P35269 517 aaKnown RBP eCLIP11.42□□□□□ -0.583e-7■■■■□ 23
SKI-204ENST00000508416 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.69■□□□□ 0.262e-6■■■■□ 22.9
SKI-204ENST00000508416 AATFQ9NY61 560 aaKnown RBP eCLIP12.8□□□□□ -0.363e-6■■■■□ 22.4
SKI-204ENST00000508416 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.88□□□□□ -0.679e-7■■■■□ 22.4
SKI-204ENST00000508416 TROVE2P10155 538 aaKnown RBP eCLIP9.71□□□□□ -0.864e-7■■■■□ 21.4
SKI-204ENST00000508416 NONOQ15233 471 aaKnown RBP eCLIP12.02□□□□□ -0.491e-6■■■■□ 21
SKI-204ENST00000508416 NIPBLQ6KC79 2804 aaeCLIP8.85□□□□□ -0.995e-6■■■■□ 20.8
SKI-204ENST00000508416 RBFOX2O43251 390 aaKnown RBP eCLIP8.3□□□□□ -1.082e-6■■■■□ 20.3
SKI-204ENST00000508416 PCBP1Q15365 356 aaKnown RBP eCLIP11.66□□□□□ -0.548e-10■■■■□ 19.8
SKI-204ENST00000508416 EIF4G2P78344 907 aaKnown RBP eCLIP14.82□□□□□ -0.041e-6■■■■□ 19.6
SKI-204ENST00000508416 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.12■□□□□ 0.174e-6■■■□□ 19.2
SKI-204ENST00000508416 HNRNPLP14866 589 aaKnown RBP eCLIP10.87□□□□□ -0.675e-9■■■□□ 19.2
SKI-204ENST00000508416 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.19□□□□□ -0.461e-6■■■□□ 19.1
SKI-204ENST00000508416 LSM11P83369 360 aaKnown RBP eCLIP9.34□□□□□ -0.913e-6■■■□□ 18.9
SKI-204ENST00000508416 HLTFQ14527 1009 aaKnown RBP eCLIP10.38□□□□□ -0.754e-7■■■□□ 18.9
SKI-204ENST00000508416 ZC3H11AO75152 810 aaKnown RBP eCLIP11.53□□□□□ -0.567e-6■■■□□ 18.7
SKI-204ENST00000508416 AGGF1Q8N302 714 aaeCLIP10.4□□□□□ -0.746e-11■■■□□ 18.7
SKI-204ENST00000508416 SMNDC1O75940 238 aaKnown RBP eCLIP9.41□□□□□ -0.92e-6■■■□□ 18.4
SKI-204ENST00000508416 NCBP2P52298 156 aaKnown RBP eCLIP9.79□□□□□ -0.845e-7■■■□□ 18.3
SKI-204ENST00000508416 FUSP35637 526 aaKnown RBP eCLIP6.98□□□□□ -1.292e-6■■■□□ 18.1
SKI-204ENST00000508416 NOLC1Q14978 699 aaKnown RBP eCLIP11.54□□□□□ -0.562e-8■■■□□ 17.8
SKI-204ENST00000508416 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.02□□□□□ -0.971e-6■■■□□ 17
SKI-204ENST00000508416 ILF3Q12906 894 aaKnown RBP eCLIP10.44□□□□□ -0.748e-8■■■□□ 16.1
SKI-204ENST00000508416 SFPQP23246 707 aaKnown RBP eCLIP11.69□□□□□ -0.541e-6■■■□□ 15.7
SKI-204ENST00000508416 FKBP4Q02790 459 aaKnown RBP eCLIP13.27□□□□□ -0.291e-6■■■□□ 15.7
SKI-204ENST00000508416 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.81□□□□□ -0.842e-7■■■□□ 15.4
SKI-204ENST00000508416 HNRNPCP07910 306 aaKnown RBP eCLIP7.93□□□□□ -1.141e-6■■■□□ 15.4
SKI-204ENST00000508416 GRSF1Q12849 480 aaKnown RBP eCLIP10.96□□□□□ -0.656e-8■■■□□ 15.4
SKI-204ENST00000508416 RBM5P52756 815 aaKnown RBP eCLIP12.93□□□□□ -0.342e-6■■■□□ 15.3
SKI-204ENST00000508416 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.8□□□□□ -0.526e-6■■■□□ 15.1
SKI-204ENST00000508416 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.22□□□□□ -0.614e-7■■■□□ 14.7
SKI-204ENST00000508416 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.99□□□□□ -0.652e-6■■■□□ 14.6
SKI-204ENST00000508416 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.09□□□□□ -0.634e-6■■□□□ 14.5
SKI-204ENST00000508416 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.82□□□□□ -0.688e-7■■□□□ 14.3
SKI-204ENST00000508416 NKRFO15226 690 aaKnown RBP eCLIP12.06□□□□□ -0.481e-6■■□□□ 14.2
SKI-204ENST00000508416 TIA1P31483 386 aaKnown RBP eCLIP9.88□□□□□ -0.832e-6■■□□□ 13.9
SKI-204ENST00000508416 SF3A3Q12874 501 aaKnown RBP eCLIP9.71□□□□□ -0.863e-6■■□□□ 13.5
SKI-204ENST00000508416 EIF3DO15371 548 aaKnown RBP eCLIP11.53□□□□□ -0.565e-7■■□□□ 13.5
SKI-204ENST00000508416 TAF15Q92804 592 aaKnown RBP eCLIP8.51□□□□□ -1.053e-6■■□□□ 13
SKI-204ENST00000508416 HNRNPKP61978 463 aaKnown RBP eCLIP10.5□□□□□ -0.739e-7■■□□□ 12.9
SKI-204ENST00000508416 RBM22Q9NW64 420 aaKnown RBP eCLIP10.69□□□□□ -0.76e-27■■□□□ 12.9
SKI-204ENST00000508416 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.53□□□□□ -1.041e-6■■□□□ 12.2
SKI-204ENST00000508416 PRPF4O43172 522 aaKnown RBP eCLIP10.02□□□□□ -0.812e-6■■□□□ 12.1
SKI-204ENST00000508416 SRSF9Q13242 221 aaKnown RBP eCLIP6.49□□□□□ -1.374e-6■■□□□ 12.1
SKI-204ENST00000508416 KHSRPQ92945 711 aaKnown RBP eCLIP11.14□□□□□ -0.631e-8■□□□□ 10.9
SKI-204ENST00000508416 SRSF7Q16629 238 aaKnown RBP eCLIP8.49□□□□□ -1.052e-10■□□□□ 10.8
SKI-204ENST00000508416 ZNF622Q969S3 477 aaKnown RBP eCLIP13.44□□□□□ -0.261e-6■□□□□ 10.8
SKI-204ENST00000508416 BCCIPQ9P287 314 aaKnown RBP eCLIP10.82□□□□□ -0.682e-6■□□□□ 10.4
SKI-204ENST00000508416 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.62□□□□□ -0.872e-6■□□□□ 10.4
SKI-204ENST00000508416 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11□□□□□ -0.653e-7■□□□□ 10.2
SKI-204ENST00000508416 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.65□□□□□ -0.061e-6■□□□□ 9.8
SKI-204ENST00000508416 DKC1O60832 514 aaKnown RBP eCLIP11.85□□□□□ -0.514e-26■□□□□ 9.7
SKI-204ENST00000508416 POLR2GP62487 172 aaKnown RBP eCLIP8.04□□□□□ -1.125e-6■□□□□ 9.3
SKI-204ENST00000508416 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.49□□□□□ -0.736e-9■□□□□ 8.9
Retrieved 81 of 81 RNA–protein pairs in 39.5 ms