RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 AQRO60306 1485 aaKnown RBP eCLIP16.5■□□□□ 0.232e-20■■■■■ 104.7
DDX41-203ENST00000504781 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.84□□□□□ -0.672e-8■■■■■ 67.3
DDX41-203ENST00000504781 METAP2P50579 478 aaKnown RBP eCLIP11.85□□□□□ -0.514e-6■■■■■ 28.4
DDX41-203ENST00000504781 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.03□□□□□ -1.123e-7■■■■■ 27.8
DDX41-203ENST00000504781 SF3A3Q12874 501 aaKnown RBP eCLIP9.89□□□□□ -0.832e-7■■■■■ 27.2
DDX41-203ENST00000504781 U2AF1Q01081 240 aaKnown RBP eCLIP13.42□□□□□ -0.263e-7■■■■□ 19.9
DDX41-203ENST00000504781 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.15□□□□□ -0.624e-7■■■□□ 17.4
DDX41-203ENST00000504781 PPIGQ13427 754 aaKnown RBP eCLIP10.72□□□□□ -0.693e-8■■■□□ 16.8
DDX41-203ENST00000504781 ZNF622Q969S3 477 aaKnown RBP eCLIP12.16□□□□□ -0.461e-8■■■□□ 14.9
DDX41-203ENST00000504781 U2AF2P26368 475 aaKnown RBP eCLIP11.73□□□□□ -0.532e-13■■□□□ 14.3
DDX41-203ENST00000504781 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.64□□□□□ -0.073e-8■■□□□ 14.2
DDX41-203ENST00000504781 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.72□□□□□ -0.696e-9■■□□□ 13.4
DDX41-203ENST00000504781 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.51□□□□□ -0.732e-8■■□□□ 12.8
DDX41-203ENST00000504781 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.23□□□□□ -0.452e-6■□□□□ 10.4
DDX41-203ENST00000504781 YBX3P16989 372 aaKnown RBP eCLIP12.42□□□□□ -0.423e-6■□□□□ 10.1
DDX41-203ENST00000504781 PUM1Q14671 1186 aaKnown RBP eCLIP9.8□□□□□ -0.846e-7■□□□□ 9.6
DDX41-203ENST00000504781 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.2□□□□□ -0.941e-5■□□□□ 9.3
DDX41-203ENST00000504781 SRSF1Q07955 248 aaKnown RBP eCLIP8.83□□□□□ -14e-6■□□□□ 8.1
Retrieved 18 of 18 RNA–protein pairs in 14.5 ms