RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 G3BP1Q13283 466 aaKnown RBP eCLIP10.48□□□□□ -0.731e-323■□□□□ 8.7
FN1-227ENST00000498719 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.15□□□□□ -0.941e-323■■■□□ 15.1
FN1-227ENST00000498719 RPS3P23396 243 aaKnown RBP eCLIP8.53□□□□□ -1.041e-323■■■□□ 17.1
FN1-227ENST00000498719 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.37□□□□□ -0.755e-83■■■■□ 23.8
FN1-227ENST00000498719 NOLC1Q14978 699 aaKnown RBP eCLIP10.33□□□□□ -0.761e-80■□□□□ 9.8
FN1-227ENST00000498719 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.01□□□□□ -0.972e-67■□□□□ 11.2
FN1-227ENST00000498719 YBX3P16989 372 aaKnown RBP eCLIP8.99□□□□□ -0.971e-57■□□□□ 10.4
FN1-227ENST00000498719 NIP7Q9Y221 180 aaKnown RBP eCLIP10.04□□□□□ -0.82e-52■□□□□ 11.1
FN1-227ENST00000498719 AQRO60306 1485 aaKnown RBP eCLIP12.58□□□□□ -0.391e-46■■■■■ 36
FN1-227ENST00000498719 ZC3H11AO75152 810 aaKnown RBP eCLIP9.27□□□□□ -0.922e-43■□□□□ 8.4
FN1-227ENST00000498719 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.53□□□□□ -1.044e-37■■□□□ 13.8
FN1-227ENST00000498719 DDX6P26196 483 aaKnown RBP eCLIP8.29□□□□□ -1.088e-30■■■□□ 15.2
FN1-227ENST00000498719 AKAP1Q92667 903 aaKnown RBP eCLIP8.03□□□□□ -1.122e-27■□□□□ 9.6
FN1-227ENST00000498719 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.62□□□□□ -1.031e-26■□□□□ 10.1
FN1-227ENST00000498719 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.73□□□□□ -1.019e-24■■■■□ 26
FN1-227ENST00000498719 IGF2BP3O00425 579 aaKnown RBP eCLIP9.21□□□□□ -0.935e-20■■■■■ 42.7
FN1-227ENST00000498719 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.78□□□□□ -1.323e-18■■■■■ 36
FN1-227ENST00000498719 TIAL1Q01085 375 aaKnown RBP eCLIP8.75□□□□□ -1.016e-18■■■□□ 17.1
FN1-227ENST00000498719 NKRFO15226 690 aaKnown RBP eCLIP9.83□□□□□ -0.842e-17■□□□□ 8.6
FN1-227ENST00000498719 FUBP3Q96I24 572 aaKnown RBP eCLIP9.5□□□□□ -0.894e-15■□□□□ 10.6
FN1-227ENST00000498719 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.83□□□□□ -0.841e-14■■□□□ 11.4
FN1-227ENST00000498719 UPF1Q92900 1129 aaKnown RBP eCLIP10.38□□□□□ -0.754e-14■□□□□ 8.6
FN1-227ENST00000498719 SF3A3Q12874 501 aaKnown RBP eCLIP9.41□□□□□ -0.91e-13■□□□□ 8.5
FN1-227ENST00000498719 SND1Q7KZF4 910 aaKnown RBP eCLIP11.66□□□□□ -0.542e-10■■■■■ 38.7
FN1-227ENST00000498719 HNRNPKP61978 463 aaKnown RBP eCLIP8.04□□□□□ -1.121e-9■■■□□ 18.8
FN1-227ENST00000498719 TIA1P31483 386 aaKnown RBP eCLIP8.39□□□□□ -1.071e-9■■■■■ 27.2
FN1-227ENST00000498719 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.42□□□□□ -0.744e-7■■■■□ 24.1
Retrieved 27 of 27 RNA–protein pairs in 21.6 ms