RNA: ENST00000496169.5

MKRN1-215, Transcript of makorin ring finger protein 1, humanhuman

TSL 2

Gene MKRN1, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1-215ENST00000496169 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.82■■□□□ 1.563e-6■■■■■ 61.1
MKRN1-215ENST00000496169 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.01■■□□□ 1.275e-20■■■■■ 60.7
MKRN1-215ENST00000496169 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.45■■□□□ 1.982e-9■■■■■ 37.6
MKRN1-215ENST00000496169 EFTUD2Q15029 972 aaKnown RBP eCLIP22.46■■□□□ 1.194e-6■■■■■ 33.8
MKRN1-215ENST00000496169 DDX42Q86XP3 938 aaKnown RBP eCLIP24.52■■□□□ 1.526e-6■■■■■ 27.6
MKRN1-215ENST00000496169 SUB1P53999 127 aaKnown RBP eCLIP17.6■□□□□ 0.412e-7■■■■□ 24.9
MKRN1-215ENST00000496169 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.86■□□□□ 0.775e-7■■■■□ 23.5
MKRN1-215ENST00000496169 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.56■■■■□ 3.64e-6■■■■□ 19.8
MKRN1-215ENST00000496169 DDX3XO00571 662 aaKnown RBP eCLIP23.91■■□□□ 1.423e-11■■■■□ 19.6
MKRN1-215ENST00000496169 TIA1P31483 386 aaKnown RBP eCLIP21.51■■□□□ 1.032e-6■■■□□ 19
MKRN1-215ENST00000496169 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.86■■□□□ 1.574e-7■■■□□ 15.2
MKRN1-215ENST00000496169 SF3B4Q15427 424 aaKnown RBP eCLIP21.11■□□□□ 0.976e-7■■□□□ 14.5
MKRN1-215ENST00000496169 PABPC4Q13310 644 aaKnown RBP eCLIP27.91■■■□□ 2.061e-6■■□□□ 13.4
MKRN1-215ENST00000496169 XRCC6P12956 609 aaKnown RBP eCLIP25.96■■□□□ 1.756e-7■■□□□ 13
MKRN1-215ENST00000496169 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.64■■■■□ 3.32e-7■■□□□ 12.3
MKRN1-215ENST00000496169 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.22■■□□□ 1.799e-8■■□□□ 11.7
MKRN1-215ENST00000496169 HNRNPCP07910 306 aaKnown RBP eCLIP19.47■□□□□ 0.713e-6■■□□□ 11.7
MKRN1-215ENST00000496169 AQRO60306 1485 aaKnown RBP eCLIP41■■■■■ 4.152e-7■□□□□ 10.5
MKRN1-215ENST00000496169 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.16■□□□□ 0.826e-9■□□□□ 9.9
MKRN1-215ENST00000496169 NONOQ15233 471 aaKnown RBP eCLIP26.39■■□□□ 1.812e-6■□□□□ 9.3
MKRN1-215ENST00000496169 YBX3P16989 372 aaKnown RBP eCLIP30.52■■■□□ 2.482e-6■□□□□ 9.1
MKRN1-215ENST00000496169 KHSRPQ92945 711 aaKnown RBP eCLIP25.36■■□□□ 1.652e-8■□□□□ 8.8
MKRN1-215ENST00000496169 ILF3Q12906 894 aaKnown RBP eCLIP23.11■■□□□ 1.295e-6■□□□□ 8.5
Retrieved 23 of 23 RNA–protein pairs in 19.5 ms