RNA: ENST00000494172.1

FAM178B-205, Transcript of family with sequence similarity 178 member B, humanhuman

TSL 3

Gene FAM178B, Length 592 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM178B-205ENST00000494172 ZC3H11AO75152 810 aaKnown RBP eCLIP19.76■□□□□ 0.757e-66■■■■□ 20.5
FAM178B-205ENST00000494172 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.69■□□□□ 0.588e-39■■■■■ 82.2
FAM178B-205ENST00000494172 DDX3XO00571 662 aaKnown RBP eCLIP18.62■□□□□ 0.578e-33■■□□□ 12.8
FAM178B-205ENST00000494172 PUM1Q14671 1186 aaKnown RBP eCLIP18.22■□□□□ 0.518e-25■■□□□ 12.1
FAM178B-205ENST00000494172 ZNF622Q969S3 477 aaKnown RBP eCLIP23.09■■□□□ 1.291e-24■■■□□ 15.2
FAM178B-205ENST00000494172 RPS3P23396 243 aaKnown RBP eCLIP17.57■□□□□ 0.44e-23■■■□□ 16.3
FAM178B-205ENST00000494172 EIF3GO75821 320 aaKnown RBP eCLIP12.91□□□□□ -0.341e-16■■■□□ 18.9
FAM178B-205ENST00000494172 NOLC1Q14978 699 aaKnown RBP eCLIP19.72■□□□□ 0.752e-16■□□□□ 8.1
FAM178B-205ENST00000494172 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22■■□□□ 1.111e-15■□□□□ 8.7
FAM178B-205ENST00000494172 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.21■□□□□ 0.022e-15■■■■□ 23.2
FAM178B-205ENST00000494172 SND1Q7KZF4 910 aaKnown RBP eCLIP18.63■□□□□ 0.577e-14■■■■□ 21.6
FAM178B-205ENST00000494172 SRSF1Q07955 248 aaKnown RBP eCLIP16.59■□□□□ 0.252e-13■□□□□ 10.6
FAM178B-205ENST00000494172 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.4■□□□□ 0.386e-13■□□□□ 9.4
FAM178B-205ENST00000494172 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.28■□□□□ 0.682e-12■■■■■ 57.6
FAM178B-205ENST00000494172 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.36■■□□□ 1.972e-12■□□□□ 10.8
FAM178B-205ENST00000494172 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.62■□□□□ 0.573e-12■■■□□ 15.2
FAM178B-205ENST00000494172 RBM15Q96T37 977 aaKnown RBP eCLIP18.04■□□□□ 0.483e-12■□□□□ 10.9
FAM178B-205ENST00000494172 AGGF1Q8N302 714 aaeCLIP17.62■□□□□ 0.415e-12■□□□□ 9.1
FAM178B-205ENST00000494172 PABPC4Q13310 644 aaKnown RBP eCLIP21.46■■□□□ 1.037e-12■■□□□ 12
FAM178B-205ENST00000494172 GPKOWQ92917 476 aaPredicted RBP eCLIP20.74■□□□□ 0.911e-11■■■■■ 30.2
FAM178B-205ENST00000494172 RBFOX2O43251 390 aaKnown RBP eCLIP14.06□□□□□ -0.161e-11■■■■■ 39.2
FAM178B-205ENST00000494172 XRCC6P12956 609 aaKnown RBP eCLIP20.1■□□□□ 0.813e-11■■□□□ 11.8
FAM178B-205ENST00000494172 ZRANB2O95218 330 aaKnown RBP eCLIP18.17■□□□□ 0.52e-10■■□□□ 12.4
FAM178B-205ENST00000494172 NCBP2P52298 156 aaKnown RBP eCLIP16.59■□□□□ 0.253e-10■■■□□ 15
FAM178B-205ENST00000494172 DDX42Q86XP3 938 aaKnown RBP eCLIP18.94■□□□□ 0.624e-10■■■□□ 15.7
FAM178B-205ENST00000494172 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.82■■□□□ 1.082e-9■■■■■ 81.5
FAM178B-205ENST00000494172 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.34■□□□□ 0.853e-9■■■□□ 16.7
FAM178B-205ENST00000494172 AQRO60306 1485 aaKnown RBP eCLIP31.46■■■□□ 2.635e-9■■■■□ 22
FAM178B-205ENST00000494172 EWSR1Q01844 656 aaKnown RBP eCLIP13.23□□□□□ -0.297e-9■■■■■ 66.3
FAM178B-205ENST00000494172 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.04■□□□□ 0.968e-9■■□□□ 14.2
FAM178B-205ENST00000494172 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.74■□□□□ 0.279e-9■■■■■ 80.2
FAM178B-205ENST00000494172 WDR43Q15061 677 aaKnown RBP eCLIP23.86■■□□□ 1.412e-8■■■□□ 17.3
FAM178B-205ENST00000494172 TRA2AQ13595 282 aaKnown RBP eCLIP17.6■□□□□ 0.413e-8■■■□□ 15.6
FAM178B-205ENST00000494172 AATFQ9NY61 560 aaKnown RBP eCLIP21.88■■□□□ 1.093e-8■■■■□ 19.6
FAM178B-205ENST00000494172 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.18■□□□□ 0.024e-8■■■■□ 19.4
FAM178B-205ENST00000494172 FTOQ9C0B1 505 aaKnown RBP eCLIP20.24■□□□□ 0.834e-8■■■■■ 73.4
FAM178B-205ENST00000494172 LARP4Q71RC2 724 aaKnown RBP eCLIP16.54■□□□□ 0.244e-8■■□□□ 13.3
FAM178B-205ENST00000494172 EIF4G2P78344 907 aaKnown RBP eCLIP25.21■■□□□ 1.635e-8■■■■■ 50.4
FAM178B-205ENST00000494172 SAFB2Q14151 953 aaKnown RBP eCLIP25.85■■□□□ 1.736e-8■■■□□ 15.2
FAM178B-205ENST00000494172 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.69■□□□□ 0.588e-8■■□□□ 14.1
FAM178B-205ENST00000494172 TARDBPQ13148 414 aaKnown RBP eCLIP17.74■□□□□ 0.438e-8■■■■■ 43.9
FAM178B-205ENST00000494172 DDX21Q9NR30 783 aaKnown RBP eCLIP23.36■■□□□ 1.339e-8■■■■■ 58.5
FAM178B-205ENST00000494172 GTF2F1P35269 517 aaKnown RBP eCLIP19.65■□□□□ 0.749e-8■■■■■ 161.6
FAM178B-205ENST00000494172 DDX6P26196 483 aaKnown RBP eCLIP19.11■□□□□ 0.651e-7■■■□□ 17
FAM178B-205ENST00000494172 HNRNPMP52272 730 aaKnown RBP eCLIP28.21■■■□□ 2.111e-7■■■■□ 22.3
FAM178B-205ENST00000494172 RBM22Q9NW64 420 aaKnown RBP eCLIP18.14■□□□□ 0.492e-7■■□□□ 13
FAM178B-205ENST00000494172 TAF15Q92804 592 aaKnown RBP eCLIP14.54□□□□□ -0.082e-7■■■□□ 15.6
FAM178B-205ENST00000494172 NONOQ15233 471 aaKnown RBP eCLIP20.45■□□□□ 0.862e-7■■■■□ 22.4
FAM178B-205ENST00000494172 FUSP35637 526 aaKnown RBP eCLIP11.9□□□□□ -0.52e-7■■■□□ 17.5
FAM178B-205ENST00000494172 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.11■□□□□ 0.972e-7■■□□□ 12.2
FAM178B-205ENST00000494172 HNRNPKP61978 463 aaKnown RBP eCLIP17.99■□□□□ 0.472e-7■■■□□ 17.9
FAM178B-205ENST00000494172 SF3B4Q15427 424 aaKnown RBP eCLIP16.29■□□□□ 0.22e-7■■□□□ 13.3
FAM178B-205ENST00000494172 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.74■■■□□ 2.033e-7■■■□□ 15
FAM178B-205ENST00000494172 NSUN2Q08J23 767 aaKnown RBP eCLIP18.23■□□□□ 0.513e-7■■■□□ 14.9
FAM178B-205ENST00000494172 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.55■□□□□ 0.43e-7■■■■□ 19.4
FAM178B-205ENST00000494172 CPSF6Q16630 551 aaKnown RBP eCLIP16.95■□□□□ 0.33e-7■■□□□ 13.7
FAM178B-205ENST00000494172 SRSF7Q16629 238 aaKnown RBP eCLIP14.35□□□□□ -0.113e-7■■■□□ 18.5
FAM178B-205ENST00000494172 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.85■□□□□ 0.454e-7■■■□□ 15.4
FAM178B-205ENST00000494172 PUS1Q9Y606 427 aaKnown RBP eCLIP13.53□□□□□ -0.246e-7■□□□□ 9.9
FAM178B-205ENST00000494172 UPF1Q92900 1129 aaKnown RBP eCLIP24.81■■□□□ 1.566e-7■■■■■ 40.6
FAM178B-205ENST00000494172 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.73■□□□□ 0.756e-7■■□□□ 14.4
FAM178B-205ENST00000494172 MATR3P43243 847 aaKnown RBP eCLIP19.64■□□□□ 0.736e-7■■■□□ 18.2
FAM178B-205ENST00000494172 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.56■□□□□ 0.726e-7■■■■■ 29.6
FAM178B-205ENST00000494172 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.71■□□□□ 0.277e-7■□□□□ 10.8
FAM178B-205ENST00000494172 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.53■□□□□ 0.249e-7■□□□□ 8.2
FAM178B-205ENST00000494172 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.18■□□□□ 0.669e-7■■■■■ 70.4
FAM178B-205ENST00000494172 LSM11P83369 360 aaKnown RBP eCLIP15.79■□□□□ 0.129e-7■■□□□ 13.3
FAM178B-205ENST00000494172 SF3B1O75533 1304 aaKnown RBP eCLIP19.61■□□□□ 0.739e-7■■■■■ 37.7
FAM178B-205ENST00000494172 TIA1P31483 386 aaKnown RBP eCLIP16.75■□□□□ 0.271e-6■□□□□ 9.1
FAM178B-205ENST00000494172 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.16■□□□□ 0.341e-6■■□□□ 14.1
FAM178B-205ENST00000494172 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.66■□□□□ 0.581e-6■■□□□ 11.8
FAM178B-205ENST00000494172 SAFBQ15424 915 aaKnown RBP eCLIP20.36■□□□□ 0.851e-6■■□□□ 11.4
FAM178B-205ENST00000494172 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.43■■□□□ 1.021e-6■■□□□ 14.1
FAM178B-205ENST00000494172 SMNDC1O75940 238 aaKnown RBP eCLIP16.06■□□□□ 0.161e-6■■□□□ 14.2
FAM178B-205ENST00000494172 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.15■□□□□ 0.661e-6■■□□□ 11.7
FAM178B-205ENST00000494172 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.97■■■□□ 2.231e-6■■□□□ 12.6
FAM178B-205ENST00000494172 EFTUD2Q15029 972 aaKnown RBP eCLIP17.28■□□□□ 0.362e-6■■□□□ 12.3
FAM178B-205ENST00000494172 ILF3Q12906 894 aaKnown RBP eCLIP17.84■□□□□ 0.452e-6■■■□□ 14.8
FAM178B-205ENST00000494172 PTBP1P26599 531 aaKnown RBP eCLIP13.94□□□□□ -0.182e-6■□□□□ 10
FAM178B-205ENST00000494172 WRNQ14191 1432 aaPredicted RBP eCLIP31.57■■■□□ 2.642e-6■■■□□ 19.1
FAM178B-205ENST00000494172 AARSP49588 968 aaKnown RBP eCLIP19.53■□□□□ 0.722e-6■■■□□ 18.7
FAM178B-205ENST00000494172 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.99■□□□□ 0.633e-6■□□□□ 10.7
FAM178B-205ENST00000494172 U2AF2P26368 475 aaKnown RBP eCLIP20.3■□□□□ 0.843e-6■□□□□ 10.1
FAM178B-205ENST00000494172 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.08■□□□□ 0.323e-6■■■■■ 36.4
FAM178B-205ENST00000494172 HNRNPUQ00839 825 aaKnown RBP eCLIP23■■□□□ 1.273e-6■■■■□ 19.3
FAM178B-205ENST00000494172 U2AF1Q01081 240 aaKnown RBP eCLIP24.08■■□□□ 1.453e-6■■□□□ 14.1
FAM178B-205ENST00000494172 PCBP1Q15365 356 aaKnown RBP eCLIP19.98■□□□□ 0.794e-6■■■□□ 15.7
FAM178B-205ENST00000494172 NIPBLQ6KC79 2804 aaeCLIP15.31■□□□□ 0.041e-5■■■■□ 22.3
Retrieved 88 of 88 RNA–protein pairs in 227.9 ms