RNA: ENST00000493536.5

SNHG16-202, Transcript of small nucleolar RNA host gene 16, humanhuman

TSL 1 (best)

Gene SNHG16, Length 2,424 nt, Biotype lincRNA, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG16-202ENST00000493536 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.42□□□□□ -0.91e-79■■■■□ 24.1
SNHG16-202ENST00000493536 NOLC1Q14978 699 aaKnown RBP eCLIP9.69□□□□□ -0.863e-75■■■■■ 172.5
SNHG16-202ENST00000493536 RPS3P23396 243 aaKnown RBP eCLIP8.72□□□□□ -1.012e-40■□□□□ 9.8
SNHG16-202ENST00000493536 TROVE2P10155 538 aaKnown RBP eCLIP8.79□□□□□ -15e-39■□□□□ 9.8
SNHG16-202ENST00000493536 ZRANB2O95218 330 aaKnown RBP eCLIP9.27□□□□□ -0.932e-33■■■■■ 94.1
SNHG16-202ENST00000493536 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.29□□□□□ -1.087e-31■■■■■ 27.6
SNHG16-202ENST00000493536 DDX3XO00571 662 aaKnown RBP eCLIP9.47□□□□□ -0.892e-29■■■■□ 19.4
SNHG16-202ENST00000493536 TRA2AQ13595 282 aaKnown RBP eCLIP8.19□□□□□ -1.13e-28■■□□□ 13
SNHG16-202ENST00000493536 WDR43Q15061 677 aaKnown RBP eCLIP11.8□□□□□ -0.525e-28■□□□□ 9.6
SNHG16-202ENST00000493536 U2AF1Q01081 240 aaKnown RBP eCLIP11.65□□□□□ -0.543e-26■□□□□ 10
SNHG16-202ENST00000493536 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.55□□□□□ -0.882e-24■□□□□ 8.3
SNHG16-202ENST00000493536 PCBP2Q15366 365 aaKnown RBP eCLIP8.63□□□□□ -1.032e-21■□□□□ 8.7
SNHG16-202ENST00000493536 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.63□□□□□ -1.034e-21■■■■□ 21.8
SNHG16-202ENST00000493536 AATFQ9NY61 560 aaKnown RBP eCLIP10.42□□□□□ -0.743e-20■■■■■ 65.4
SNHG16-202ENST00000493536 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.35□□□□□ -1.079e-20■■■■■ 27.5
SNHG16-202ENST00000493536 PTBP1P26599 531 aaKnown RBP eCLIP7.69□□□□□ -1.182e-16■■□□□ 12.2
SNHG16-202ENST00000493536 SMNDC1O75940 238 aaKnown RBP eCLIP8.14□□□□□ -1.113e-16■■■■□ 19.6
SNHG16-202ENST00000493536 HNRNPLP14866 589 aaKnown RBP eCLIP8.7□□□□□ -1.027e-15■■■□□ 15.7
SNHG16-202ENST00000493536 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.82□□□□□ -17e-15■□□□□ 9.5
SNHG16-202ENST00000493536 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.54□□□□□ -0.887e-15■■■■■ 32.6
SNHG16-202ENST00000493536 DKC1O60832 514 aaKnown RBP eCLIP9.75□□□□□ -0.852e-13■■■■■ 46.9
SNHG16-202ENST00000493536 U2AF2P26368 475 aaKnown RBP eCLIP10.16□□□□□ -0.784e-13■■■□□ 18.2
SNHG16-202ENST00000493536 TIA1P31483 386 aaKnown RBP eCLIP8.45□□□□□ -1.062e-12■■■■□ 23.1
SNHG16-202ENST00000493536 NKRFO15226 690 aaKnown RBP eCLIP9.67□□□□□ -0.863e-12■■□□□ 12.6
SNHG16-202ENST00000493536 XRCC6P12956 609 aaKnown RBP eCLIP10.06□□□□□ -0.84e-12■■■■■ 34.4
SNHG16-202ENST00000493536 NIP7Q9Y221 180 aaKnown RBP eCLIP10.78□□□□□ -0.681e-11■■■■■ 42.1
SNHG16-202ENST00000493536 PABPC4Q13310 644 aaKnown RBP eCLIP9.85□□□□□ -0.835e-11■■■□□ 15.4
SNHG16-202ENST00000493536 TIAL1Q01085 375 aaKnown RBP eCLIP8.73□□□□□ -1.018e-11■□□□□ 10.3
SNHG16-202ENST00000493536 AQRO60306 1485 aaKnown RBP eCLIP13.83□□□□□ -0.25e-10■■■■□ 19.4
SNHG16-202ENST00000493536 YBX3P16989 372 aaKnown RBP eCLIP10.06□□□□□ -0.82e-9■■□□□ 11.7
SNHG16-202ENST00000493536 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.88□□□□□ -0.993e-9■□□□□ 11.3
SNHG16-202ENST00000493536 UPF1Q92900 1129 aaKnown RBP eCLIP10.31□□□□□ -0.766e-9■□□□□ 9
SNHG16-202ENST00000493536 EIF3HO15372 352 aaKnown RBP eCLIP9.03□□□□□ -0.967e-9■■□□□ 13.4
SNHG16-202ENST00000493536 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.15□□□□□ -0.31e-8■■■□□ 15.3
SNHG16-202ENST00000493536 SF3B4Q15427 424 aaKnown RBP eCLIP7.71□□□□□ -1.182e-8■■■■□ 19.5
SNHG16-202ENST00000493536 NIPBLQ6KC79 2804 aaeCLIP6.66□□□□□ -1.344e-8■■■■■ 52.7
SNHG16-202ENST00000493536 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.8□□□□□ -14e-8■■■□□ 18
SNHG16-202ENST00000493536 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.68□□□□□ -0.865e-8■■■□□ 17.8
SNHG16-202ENST00000493536 SF3A3Q12874 501 aaKnown RBP eCLIP8.83□□□□□ -15e-8■■■■□ 19.8
SNHG16-202ENST00000493536 WRNQ14191 1432 aaPredicted RBP eCLIP14.48□□□□□ -0.096e-8■■□□□ 11.5
SNHG16-202ENST00000493536 SF3B1O75533 1304 aaKnown RBP eCLIP9.21□□□□□ -0.941e-7■■■■■ 51.7
SNHG16-202ENST00000493536 SSBP05455 408 aaKnown RBP eCLIP9.86□□□□□ -0.831e-7■■□□□ 13.3
SNHG16-202ENST00000493536 TARDBPQ13148 414 aaKnown RBP eCLIP8.15□□□□□ -1.12e-7■■□□□ 14
SNHG16-202ENST00000493536 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.21□□□□□ -0.943e-7■■■■□ 25.2
SNHG16-202ENST00000493536 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.05□□□□□ -1.284e-7■■■■□ 25
SNHG16-202ENST00000493536 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.78□□□□□ -0.844e-7■■■□□ 16.6
SNHG16-202ENST00000493536 EFTUD2Q15029 972 aaKnown RBP eCLIP8.97□□□□□ -0.975e-7■□□□□ 10.4
SNHG16-202ENST00000493536 AARSP49588 968 aaKnown RBP eCLIP9.26□□□□□ -0.936e-7■□□□□ 9.5
SNHG16-202ENST00000493536 ILF3Q12906 894 aaKnown RBP eCLIP8.5□□□□□ -1.057e-7■■□□□ 11.9
SNHG16-202ENST00000493536 SUB1P53999 127 aaKnown RBP eCLIP7.06□□□□□ -1.287e-7■■■■■ 28.4
SNHG16-202ENST00000493536 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.02□□□□□ -0.978e-7■■■■■ 34.4
SNHG16-202ENST00000493536 IGF2BP3O00425 579 aaKnown RBP eCLIP9.69□□□□□ -0.861e-6■■■□□ 18.5
SNHG16-202ENST00000493536 GPKOWQ92917 476 aaPredicted RBP eCLIP10.13□□□□□ -0.791e-6■■■■□ 25
SNHG16-202ENST00000493536 PCBP1Q15365 356 aaKnown RBP eCLIP9.47□□□□□ -0.892e-6■■■□□ 15.6
SNHG16-202ENST00000493536 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.32□□□□□ -0.922e-6■□□□□ 10.4
SNHG16-202ENST00000493536 HNRNPCP07910 306 aaKnown RBP eCLIP7.55□□□□□ -1.22e-6■□□□□ 10.6
SNHG16-202ENST00000493536 RBM22Q9NW64 420 aaKnown RBP eCLIP9□□□□□ -0.977e-6■■■■□ 24.6
Retrieved 57 of 57 RNA–protein pairs in 36.3 ms