RNA: ENST00000490677.1

HOXB3-211, Transcript of homeobox B3, humanhuman

TSL 1 (best) BASIC

Gene HOXB3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-211ENST00000490677 UTP3Q9NQZ2 479 aaKnown RBP eCLIP29.5■■■□□ 2.312e-8■■■■■ 246.4
HOXB3-211ENST00000490677 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP25.23■■□□□ 1.632e-8■■■■■ 72.2
HOXB3-211ENST00000490677 PTBP1P26599 531 aaKnown RBP eCLIP20.88■□□□□ 0.933e-7■■■■■ 51.9
HOXB3-211ENST00000490677 TARDBPQ13148 414 aaKnown RBP eCLIP28.12■■■□□ 2.098e-7■■■■■ 37.6
HOXB3-211ENST00000490677 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP26.14■■□□□ 1.781e-9■■■■■ 33.7
HOXB3-211ENST00000490677 RBM15Q96T37 977 aaKnown RBP eCLIP27.9■■■□□ 2.068e-8■■■■□ 25.8
HOXB3-211ENST00000490677 QKIQ96PU8 341 aaKnown RBP eCLIP27.46■■□□□ 1.995e-6■■■■□ 24.8
HOXB3-211ENST00000490677 HNRNPMP52272 730 aaKnown RBP eCLIP44.59■■■■■ 4.732e-6■■■■□ 24.7
HOXB3-211ENST00000490677 AQRO60306 1485 aaKnown RBP eCLIP50.31■■■■■ 5.643e-7■■■■□ 23.1
HOXB3-211ENST00000490677 U2AF1Q01081 240 aaKnown RBP eCLIP37.25■■■■□ 3.554e-6■■■■□ 20.8
HOXB3-211ENST00000490677 EIF4G2P78344 907 aaKnown RBP eCLIP38.62■■■■□ 3.774e-7■■■□□ 18.3
HOXB3-211ENST00000490677 HNRNPKP61978 463 aaKnown RBP eCLIP28.11■■■□□ 2.092e-9■■■□□ 16.8
HOXB3-211ENST00000490677 GTF2F1P35269 517 aaKnown RBP eCLIP31.25■■■□□ 2.592e-6■■■□□ 14.6
HOXB3-211ENST00000490677 GPKOWQ92917 476 aaPredicted RBP eCLIP32.19■■■□□ 2.749e-6■■□□□ 14.5
HOXB3-211ENST00000490677 MATR3P43243 847 aaKnown RBP eCLIP30.29■■■□□ 2.442e-7■■□□□ 14.4
HOXB3-211ENST00000490677 SRSF1Q07955 248 aaKnown RBP eCLIP26.73■■□□□ 1.872e-6■■□□□ 13
HOXB3-211ENST00000490677 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP22.58■■□□□ 1.214e-6■□□□□ 10.9
HOXB3-211ENST00000490677 U2AF2P26368 475 aaKnown RBP eCLIP30.9■■■□□ 2.542e-6■□□□□ 10.7
Retrieved 18 of 18 RNA–protein pairs in 36.5 ms