RNA: ENST00000490546.1

PUM1-210, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 4

Gene PUM1, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-210ENST00000490546 NOLC1Q14978 699 aaKnown RBP eCLIP11.3□□□□□ -0.61e-323■■■■■ 88.1
PUM1-210ENST00000490546 AATFQ9NY61 560 aaKnown RBP eCLIP12.4□□□□□ -0.421e-323■■■■■ 70.8
PUM1-210ENST00000490546 DKC1O60832 514 aaKnown RBP eCLIP11.62□□□□□ -0.551e-17■■■■■ 63.6
PUM1-210ENST00000490546 SMNDC1O75940 238 aaKnown RBP eCLIP9.16□□□□□ -0.941e-63■■■■■ 53.6
PUM1-210ENST00000490546 NIP7Q9Y221 180 aaKnown RBP eCLIP13.02□□□□□ -0.332e-60■■■■■ 52.7
PUM1-210ENST00000490546 PCBP2Q15366 365 aaKnown RBP eCLIP10.03□□□□□ -0.82e-18■■■■■ 48.9
PUM1-210ENST00000490546 AQRO60306 1485 aaKnown RBP eCLIP17.03■□□□□ 0.323e-7■■■■■ 40.2
PUM1-210ENST00000490546 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.49□□□□□ -0.731e-41■■■■■ 39.4
PUM1-210ENST00000490546 EIF3HO15372 352 aaKnown RBP eCLIP10.41□□□□□ -0.742e-6■■■■■ 30.5
PUM1-210ENST00000490546 SF3B4Q15427 424 aaKnown RBP eCLIP9.32□□□□□ -0.923e-7■■■■■ 28.9
PUM1-210ENST00000490546 ILF3Q12906 894 aaKnown RBP eCLIP10.17□□□□□ -0.782e-7■■■■■ 28.2
PUM1-210ENST00000490546 GPKOWQ92917 476 aaPredicted RBP eCLIP11.92□□□□□ -0.54e-13■■■■■ 26.9
PUM1-210ENST00000490546 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.17□□□□□ -0.626e-21■■■■□ 25.3
PUM1-210ENST00000490546 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.92□□□□□ -0.664e-7■■■■□ 24.1
PUM1-210ENST00000490546 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.57□□□□□ -1.042e-12■■■■□ 23.7
PUM1-210ENST00000490546 XRCC6P12956 609 aaKnown RBP eCLIP11.56□□□□□ -0.562e-23■■■■□ 23.7
PUM1-210ENST00000490546 GTF2F1P35269 517 aaKnown RBP eCLIP10.83□□□□□ -0.682e-9■■■■□ 22.9
PUM1-210ENST00000490546 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.83□□□□□ -0.841e-15■■■■□ 22.2
PUM1-210ENST00000490546 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.47□□□□□ -0.731e-31■■■■□ 21.7
PUM1-210ENST00000490546 TIA1P31483 386 aaKnown RBP eCLIP9.83□□□□□ -0.843e-6■■■■□ 21.3
PUM1-210ENST00000490546 HNRNPCP07910 306 aaKnown RBP eCLIP8.07□□□□□ -1.122e-6■■■■□ 20.4
PUM1-210ENST00000490546 TARDBPQ13148 414 aaKnown RBP eCLIP9.83□□□□□ -0.844e-6■■■■□ 19.5
PUM1-210ENST00000490546 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.51□□□□□ -0.736e-8■■■■□ 19.3
PUM1-210ENST00000490546 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.34□□□□□ -0.756e-11■■■□□ 18.2
PUM1-210ENST00000490546 PTBP1P26599 531 aaKnown RBP eCLIP8.64□□□□□ -1.036e-8■■■□□ 17.9
PUM1-210ENST00000490546 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.25□□□□□ -0.612e-9■■■□□ 17.4
PUM1-210ENST00000490546 RBM22Q9NW64 420 aaKnown RBP eCLIP10.55□□□□□ -0.722e-6■■■□□ 16.4
PUM1-210ENST00000490546 PCBP1Q15365 356 aaKnown RBP eCLIP11.36□□□□□ -0.592e-16■■■□□ 16.4
PUM1-210ENST00000490546 NIPBLQ6KC79 2804 aaeCLIP8.32□□□□□ -1.081e-6■■■□□ 16.1
PUM1-210ENST00000490546 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.16□□□□□ -0.623e-8■■■□□ 15.5
PUM1-210ENST00000490546 PPIGQ13427 754 aaKnown RBP eCLIP11.26□□□□□ -0.616e-9■■□□□ 14.1
PUM1-210ENST00000490546 EFTUD2Q15029 972 aaKnown RBP eCLIP10.25□□□□□ -0.771e-6■■□□□ 13.9
PUM1-210ENST00000490546 SF3A3Q12874 501 aaKnown RBP eCLIP9.88□□□□□ -0.832e-6■■□□□ 13.6
PUM1-210ENST00000490546 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.54□□□□□ -0.41e-7■■□□□ 13.3
PUM1-210ENST00000490546 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.66■□□□□ 0.12e-9■■□□□ 13.2
PUM1-210ENST00000490546 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.56□□□□□ -0.728e-8■■□□□ 13
PUM1-210ENST00000490546 KHSRPQ92945 711 aaKnown RBP eCLIP10.8□□□□□ -0.681e-7■■□□□ 12.9
PUM1-210ENST00000490546 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.71□□□□□ -0.863e-6■■□□□ 12.6
PUM1-210ENST00000490546 U2AF2P26368 475 aaKnown RBP eCLIP11.83□□□□□ -0.521e-8■□□□□ 11.3
PUM1-210ENST00000490546 QKIQ96PU8 341 aaKnown RBP eCLIP10.58□□□□□ -0.729e-7■□□□□ 11.2
PUM1-210ENST00000490546 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.29■□□□□ 0.041e-6■□□□□ 11.2
PUM1-210ENST00000490546 YBX3P16989 372 aaKnown RBP eCLIP12.53□□□□□ -0.42e-8■□□□□ 11
PUM1-210ENST00000490546 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.16□□□□□ -0.623e-7■□□□□ 10.8
PUM1-210ENST00000490546 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.8□□□□□ -0.042e-7■□□□□ 10.7
PUM1-210ENST00000490546 ZNF622Q969S3 477 aaKnown RBP eCLIP12.8□□□□□ -0.366e-13■□□□□ 10.6
PUM1-210ENST00000490546 WRNQ14191 1432 aaPredicted RBP eCLIP17.47■□□□□ 0.391e-10■□□□□ 9.9
PUM1-210ENST00000490546 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.2□□□□□ -0.461e-12■□□□□ 9.3
PUM1-210ENST00000490546 U2AF1Q01081 240 aaKnown RBP eCLIP13.78□□□□□ -0.22e-8■□□□□ 9.2
PUM1-210ENST00000490546 TRA2AQ13595 282 aaKnown RBP eCLIP9.92□□□□□ -0.822e-46■□□□□ 8.6
PUM1-210ENST00000490546 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.62□□□□□ -1.032e-9■□□□□ 8.5
PUM1-210ENST00000490546 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.39□□□□□ -0.754e-6■□□□□ 8.5
Retrieved 51 of 51 RNA–protein pairs in 29 ms