RNA: ENST00000484566.5

DDX39B-221, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-221ENST00000484566 PABPC4Q13310 644 aaKnown RBP eCLIP10.62□□□□□ -0.714e-35■■■□□ 18.4
DDX39B-221ENST00000484566 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.84□□□□□ -0.671e-34■■□□□ 12.6
DDX39B-221ENST00000484566 SMNDC1O75940 238 aaKnown RBP eCLIP8.41□□□□□ -1.061e-28■■■□□ 15
DDX39B-221ENST00000484566 RBM15Q96T37 977 aaKnown RBP eCLIP8.58□□□□□ -1.041e-28■■□□□ 12.9
DDX39B-221ENST00000484566 SRSF1Q07955 248 aaKnown RBP eCLIP9.32□□□□□ -0.922e-26■□□□□ 8.3
DDX39B-221ENST00000484566 U2AF2P26368 475 aaKnown RBP eCLIP9.21□□□□□ -0.941e-25■■■■■ 26.8
DDX39B-221ENST00000484566 HNRNPKP61978 463 aaKnown RBP eCLIP8.76□□□□□ -1.014e-21■■□□□ 12.4
DDX39B-221ENST00000484566 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.42□□□□□ -0.423e-20■□□□□ 9.1
DDX39B-221ENST00000484566 PABPN1Q86U42 306 aaKnown RBP eCLIP18.76■□□□□ 0.593e-19■■□□□ 11.8
DDX39B-221ENST00000484566 LARP4Q71RC2 724 aaKnown RBP eCLIP7.59□□□□□ -1.191e-17■□□□□ 10.7
DDX39B-221ENST00000484566 U2AF1Q01081 240 aaKnown RBP eCLIP11.28□□□□□ -0.63e-17■■■□□ 16.1
DDX39B-221ENST00000484566 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.02□□□□□ -1.133e-17■□□□□ 9
DDX39B-221ENST00000484566 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.29■□□□□ 0.29e-16■■□□□ 13.3
DDX39B-221ENST00000484566 AQRO60306 1485 aaKnown RBP eCLIP16.02■□□□□ 0.156e-15■■■■■ 28
DDX39B-221ENST00000484566 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.83□□□□□ -1.161e-14■■■■□ 20
DDX39B-221ENST00000484566 ZNF622Q969S3 477 aaKnown RBP eCLIP11.63□□□□□ -0.556e-14■□□□□ 10.2
DDX39B-221ENST00000484566 SRSF7Q16629 238 aaKnown RBP eCLIP6.63□□□□□ -1.359e-14■■□□□ 11.6
DDX39B-221ENST00000484566 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.77□□□□□ -1.173e-13■□□□□ 9.3
DDX39B-221ENST00000484566 PPIGQ13427 754 aaKnown RBP eCLIP10.34□□□□□ -0.751e-12■■□□□ 11.4
DDX39B-221ENST00000484566 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.33□□□□□ -0.924e-12■□□□□ 10
DDX39B-221ENST00000484566 ZC3H11AO75152 810 aaKnown RBP eCLIP9.65□□□□□ -0.865e-12■■□□□ 12.8
DDX39B-221ENST00000484566 SF3B4Q15427 424 aaKnown RBP eCLIP7.85□□□□□ -1.156e-12■■■■■ 27.1
DDX39B-221ENST00000484566 PUM1Q14671 1186 aaKnown RBP eCLIP9.96□□□□□ -0.827e-11■□□□□ 8.5
DDX39B-221ENST00000484566 LSM11P83369 360 aaKnown RBP eCLIP11.18□□□□□ -0.629e-11■□□□□ 9.9
DDX39B-221ENST00000484566 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.17□□□□□ -0.783e-10■□□□□ 9.9
DDX39B-221ENST00000484566 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.55□□□□□ -1.25e-10■■■■■ 34.6
DDX39B-221ENST00000484566 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.33□□□□□ -0.766e-10■■■□□ 16.8
DDX39B-221ENST00000484566 NOLC1Q14978 699 aaKnown RBP eCLIP9.23□□□□□ -0.931e-9■■■□□ 17
DDX39B-221ENST00000484566 HLTFQ14527 1009 aaKnown RBP eCLIP8.57□□□□□ -1.042e-9■□□□□ 9.8
DDX39B-221ENST00000484566 SSBP05455 408 aaKnown RBP eCLIP9.6□□□□□ -0.875e-9■■■■■ 31.2
DDX39B-221ENST00000484566 SF3A3Q12874 501 aaKnown RBP eCLIP6.88□□□□□ -1.312e-8■■■■□ 22.8
DDX39B-221ENST00000484566 PCBP2Q15366 365 aaKnown RBP eCLIP7.94□□□□□ -1.142e-8■■■□□ 17.7
DDX39B-221ENST00000484566 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.32□□□□□ -1.243e-8■■■■□ 22.2
DDX39B-221ENST00000484566 EFTUD2Q15029 972 aaKnown RBP eCLIP7.79□□□□□ -1.166e-8■■■□□ 17
DDX39B-221ENST00000484566 SF3B1O75533 1304 aaKnown RBP eCLIP9.49□□□□□ -0.897e-8■■■■■ 30.2
DDX39B-221ENST00000484566 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.54□□□□□ -0.883e-7■■■□□ 15.3
DDX39B-221ENST00000484566 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9□□□□□ -0.977e-7■■■□□ 17.3
DDX39B-221ENST00000484566 RBM22Q9NW64 420 aaKnown RBP eCLIP8.27□□□□□ -1.099e-7■■■■■ 45.9
DDX39B-221ENST00000484566 RPS3P23396 243 aaKnown RBP eCLIP7.93□□□□□ -1.149e-7■□□□□ 10.7
DDX39B-221ENST00000484566 PCBP1Q15365 356 aaKnown RBP eCLIP9.47□□□□□ -0.891e-6■■□□□ 14.4
DDX39B-221ENST00000484566 TIA1P31483 386 aaKnown RBP eCLIP7.46□□□□□ -1.223e-6■■■□□ 18.6
DDX39B-221ENST00000484566 HNRNPA1P09651 372 aaKnown RBP eCLIP9.49□□□□□ -0.893e-6■□□□□ 11
DDX39B-221ENST00000484566 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.81□□□□□ -1.167e-6■■■■□ 23.2
Retrieved 43 of 43 RNA–protein pairs in 28.1 ms