RNA: ENST00000481121.5

NELFE-208, Transcript of negative elongation factor complex member E, humanhuman

TSL 2

Gene NELFE, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-208ENST00000481121 DDX3XO00571 662 aaKnown RBP eCLIP21.46■■□□□ 1.034e-20■■■■■ 76.5
NELFE-208ENST00000481121 SF3B1O75533 1304 aaKnown RBP eCLIP22.7■■□□□ 1.221e-19■■■■■ 448
NELFE-208ENST00000481121 AQRO60306 1485 aaKnown RBP eCLIP36.37■■■■□ 3.411e-10■■■■□ 20.9
NELFE-208ENST00000481121 PABPC4Q13310 644 aaKnown RBP eCLIP24.86■■□□□ 1.572e-10■■■■□ 19.3
NELFE-208ENST00000481121 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.69■■■□□ 2.664e-10■■□□□ 12.8
NELFE-208ENST00000481121 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.21■■□□□ 1.153e-9■■■■■ 65.2
NELFE-208ENST00000481121 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.71■□□□□ 0.434e-9■■■■□ 26.6
NELFE-208ENST00000481121 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.22■■□□□ 1.637e-9■■■■□ 20.6
NELFE-208ENST00000481121 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.13■□□□□ 0.658e-9■■■■□ 19.8
NELFE-208ENST00000481121 SRSF1Q07955 248 aaKnown RBP eCLIP19.2■□□□□ 0.662e-8■■□□□ 13.2
NELFE-208ENST00000481121 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.28■■□□□ 1.648e-8■□□□□ 9.6
NELFE-208ENST00000481121 G3BP1Q13283 466 aaKnown RBP eCLIP25.76■■□□□ 1.718e-8■■■□□ 18.4
NELFE-208ENST00000481121 PPIGQ13427 754 aaKnown RBP eCLIP23.62■■□□□ 1.371e-7■■■■□ 22.6
NELFE-208ENST00000481121 NCBP2P52298 156 aaKnown RBP eCLIP19.19■□□□□ 0.662e-7■■□□□ 11.8
NELFE-208ENST00000481121 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.9■■■□□ 2.72e-7■■■■□ 20.6
NELFE-208ENST00000481121 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.48■■□□□ 1.032e-7■■■■□ 25.7
NELFE-208ENST00000481121 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.1■■■□□ 2.092e-7■■□□□ 13.6
NELFE-208ENST00000481121 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.57■■□□□ 1.362e-7■■□□□ 14.2
NELFE-208ENST00000481121 LSM11P83369 360 aaKnown RBP eCLIP18.21■□□□□ 0.512e-7■□□□□ 8.4
NELFE-208ENST00000481121 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.71■□□□□ 0.752e-7■■■■■ 32.7
NELFE-208ENST00000481121 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.47■■■□□ 2.953e-7■□□□□ 8.5
NELFE-208ENST00000481121 YBX3P16989 372 aaKnown RBP eCLIP26.99■■□□□ 1.913e-7■■■□□ 19.1
NELFE-208ENST00000481121 SF3A3Q12874 501 aaKnown RBP eCLIP18.72■□□□□ 0.595e-7■■■■■ 27.1
NELFE-208ENST00000481121 EFTUD2Q15029 972 aaKnown RBP eCLIP19.94■□□□□ 0.785e-7■■■■■ 36.5
NELFE-208ENST00000481121 ZNF622Q969S3 477 aaKnown RBP eCLIP26.78■■□□□ 1.885e-7■□□□□ 9.9
NELFE-208ENST00000481121 FXR2P51116 673 aaKnown RBP eCLIP23.24■■□□□ 1.312e-6■■■■□ 25.2
NELFE-208ENST00000481121 U2AF2P26368 475 aaKnown RBP eCLIP23.38■■□□□ 1.332e-6■■■□□ 16.4
NELFE-208ENST00000481121 RPS3P23396 243 aaKnown RBP eCLIP20.27■□□□□ 0.833e-6■■□□□ 13.8
Retrieved 28 of 28 RNA–protein pairs in 41.8 ms