RNA: ENST00000479446.5

ABCA2-217, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 6,295 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-217ENST00000479446 SF3B1O75533 1304 aaKnown RBP eCLIP19.77■□□□□ 0.769e-8■■■■■ 107
ABCA2-217ENST00000479446 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23■■□□□ 1.273e-6■■■■■ 82.1
ABCA2-217ENST00000479446 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.84■□□□□ 0.612e-14■■■■■ 70.6
ABCA2-217ENST00000479446 RBFOX2O43251 390 aaKnown RBP eCLIP16.55■□□□□ 0.243e-9■■■■■ 58.5
ABCA2-217ENST00000479446 AQRO60306 1485 aaKnown RBP eCLIP23.63■■□□□ 1.378e-10■■■■■ 50.6
ABCA2-217ENST00000479446 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.65■□□□□ 0.16e-7■■■■■ 39.5
ABCA2-217ENST00000479446 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.3■■□□□ 1.324e-7■■■■■ 38.4
ABCA2-217ENST00000479446 GTF2F1P35269 517 aaKnown RBP eCLIP22.51■■□□□ 1.191e-9■■■■■ 37.2
ABCA2-217ENST00000479446 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.83■□□□□ 0.448e-6■■■■■ 36.9
ABCA2-217ENST00000479446 SF3B4Q15427 424 aaKnown RBP eCLIP18.16■□□□□ 0.58e-7■■■■■ 32.7
ABCA2-217ENST00000479446 PABPC4Q13310 644 aaKnown RBP eCLIP21.41■■□□□ 1.025e-7■■■■■ 30.4
ABCA2-217ENST00000479446 PUM1Q14671 1186 aaKnown RBP eCLIP19.05■□□□□ 0.644e-7■■■■■ 29.1
ABCA2-217ENST00000479446 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.48■□□□□ 0.878e-7■■■■■ 28.2
ABCA2-217ENST00000479446 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.43■■□□□ 1.342e-12■■■■□ 26.6
ABCA2-217ENST00000479446 EFTUD2Q15029 972 aaKnown RBP eCLIP20.75■□□□□ 0.919e-7■■■■□ 26.2
ABCA2-217ENST00000479446 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.58■□□□□ 0.563e-8■■■■□ 26.1
ABCA2-217ENST00000479446 PCBP2Q15366 365 aaKnown RBP eCLIP18.99■□□□□ 0.633e-6■■■■□ 25.7
ABCA2-217ENST00000479446 PRPF4O43172 522 aaKnown RBP eCLIP20.41■□□□□ 0.863e-7■■■■□ 25.6
ABCA2-217ENST00000479446 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.44■□□□□ 0.76e-7■■■■□ 24.8
ABCA2-217ENST00000479446 ZRANB2O95218 330 aaKnown RBP eCLIP21.06■□□□□ 0.965e-6■■■■□ 23.5
ABCA2-217ENST00000479446 PPIGQ13427 754 aaKnown RBP eCLIP19.1■□□□□ 0.651e-7■■■■□ 23.5
ABCA2-217ENST00000479446 METAP2P50579 478 aaKnown RBP eCLIP22.64■■□□□ 1.217e-6■■■■□ 21.8
ABCA2-217ENST00000479446 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.78■□□□□ 0.764e-6■■■■□ 19.9
ABCA2-217ENST00000479446 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.39■□□□□ 0.851e-7■■■□□ 17.4
ABCA2-217ENST00000479446 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.48■■□□□ 1.192e-7■■■□□ 16.3
ABCA2-217ENST00000479446 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.01■□□□□ 0.954e-8■■■□□ 15.7
ABCA2-217ENST00000479446 ZNF622Q969S3 477 aaKnown RBP eCLIP22.17■■□□□ 1.141e-6■■■□□ 14.8
ABCA2-217ENST00000479446 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.81■■□□□ 1.088e-6■■■□□ 14.7
ABCA2-217ENST00000479446 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.56■■□□□ 1.042e-15■■□□□ 14.4
ABCA2-217ENST00000479446 EIF3HO15372 352 aaKnown RBP eCLIP20.76■□□□□ 0.911e-7■■□□□ 12.9
ABCA2-217ENST00000479446 UPF1Q92900 1129 aaKnown RBP eCLIP19.41■□□□□ 0.75e-6■□□□□ 10.5
ABCA2-217ENST00000479446 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.24■■□□□ 1.791e-7■□□□□ 10
ABCA2-217ENST00000479446 YBX3P16989 372 aaKnown RBP eCLIP20.02■□□□□ 0.81e-7■□□□□ 9.9
ABCA2-217ENST00000479446 HLTFQ14527 1009 aaKnown RBP eCLIP22.52■■□□□ 1.24e-7■□□□□ 8.9
ABCA2-217ENST00000479446 PABPN1Q86U42 306 aaKnown RBP eCLIP27.53■■■□□ 27e-6■□□□□ 8.8
Retrieved 35 of 35 RNA–protein pairs in 21.2 ms