RNA: ENST00000477325.1

RPSA-206, Transcript of ribosomal protein SA, humanhuman


Gene RPSA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-206ENST00000477325 AATFQ9NY61 560 aaKnown RBP eCLIP11.57□□□□□ -0.56not detected■■□□□ 12.7
RPSA-206ENST00000477325 DKC1O60832 514 aaKnown RBP eCLIP10.32□□□□□ -0.76not detected■■■■■ 129.1
RPSA-206ENST00000477325 NOLC1Q14978 699 aaKnown RBP eCLIP10.11□□□□□ -0.79not detected■■□□□ 12.8
RPSA-206ENST00000477325 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.02□□□□□ -0.97not detected■■□□□ 13.7
RPSA-206ENST00000477325 SMNDC1O75940 238 aaKnown RBP eCLIP8.47□□□□□ -1.05not detected■■□□□ 12
RPSA-206ENST00000477325 PTBP1P26599 531 aaKnown RBP eCLIP6.88□□□□□ -1.31not detected■□□□□ 8.2
RPSA-206ENST00000477325 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.22□□□□□ -0.45not detected■□□□□ 8.1
RPSA-206ENST00000477325 NIPBLQ6KC79 2804 aaeCLIP9.66□□□□□ -0.86not detected■■■■■ 35.9
RPSA-206ENST00000477325 NCBP2P52298 156 aaKnown RBP eCLIP8.28□□□□□ -1.08not detected■■■■□ 20.5
RPSA-206ENST00000477325 RPS3P23396 243 aaKnown RBP eCLIP8.77□□□□□ -1.01not detected■■■■■ 121.3
RPSA-206ENST00000477325 PABPC4Q13310 644 aaKnown RBP eCLIP11.81□□□□□ -0.52not detected■■■■■ 40.5
RPSA-206ENST00000477325 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.75□□□□□ -1.01not detected■■■■■ 44.5
RPSA-206ENST00000477325 WRNQ14191 1432 aaPredicted RBP eCLIP17.5■□□□□ 0.39not detected■■■■■ 33.4
RPSA-206ENST00000477325 TIA1P31483 386 aaKnown RBP eCLIP8.34□□□□□ -1.07not detected■■■■■ 44.4
RPSA-206ENST00000477325 TIAL1Q01085 375 aaKnown RBP eCLIP8.64□□□□□ -1.03not detected■■■□□ 18.9
RPSA-206ENST00000477325 AQRO60306 1485 aaKnown RBP eCLIP18.35■□□□□ 0.53not detected■■■■■ 39.4
RPSA-206ENST00000477325 DDX3XO00571 662 aaKnown RBP eCLIP9.23□□□□□ -0.93not detected■■■□□ 19
RPSA-206ENST00000477325 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.39■□□□□ 0.21not detected■■□□□ 12.4
RPSA-206ENST00000477325 RBM22Q9NW64 420 aaKnown RBP eCLIP9.06□□□□□ -0.96not detected■□□□□ 8.1
RPSA-206ENST00000477325 EFTUD2Q15029 972 aaKnown RBP eCLIP8.54□□□□□ -1.04not detected■■■■□ 26.7
RPSA-206ENST00000477325 LARP4Q71RC2 724 aaKnown RBP eCLIP8.25□□□□□ -1.09not detected■■■■□ 26.1
RPSA-206ENST00000477325 TAF15Q92804 592 aaKnown RBP eCLIP8.12□□□□□ -1.11not detected■□□□□ 8
Retrieved 22 of 22 RNA–protein pairs in 18 ms