RNA: ENST00000476977.5

GTF2IRD1-205, Transcript of GTF2I repeat domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2IRD1, Length 5,868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1-205ENST00000476977 SF3B1O75533 1304 aaKnown RBP eCLIP15.32■□□□□ 0.049e-7■■■■■ 152.6
GTF2IRD1-205ENST00000476977 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.06■□□□□ 0.164e-10■■■■■ 86.3
GTF2IRD1-205ENST00000476977 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.89■□□□□ 0.456e-7■■■■■ 76.9
GTF2IRD1-205ENST00000476977 AARSP49588 968 aaKnown RBP eCLIP15.29■□□□□ 0.044e-6■■■■■ 61.1
GTF2IRD1-205ENST00000476977 EIF4G2P78344 907 aaKnown RBP eCLIP19.45■□□□□ 0.72e-6■■■■■ 44.7
GTF2IRD1-205ENST00000476977 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.16□□□□□ -0.148e-14■■■■■ 37.3
GTF2IRD1-205ENST00000476977 ZNF622Q969S3 477 aaKnown RBP eCLIP17.84■□□□□ 0.455e-9■■■■■ 36.6
GTF2IRD1-205ENST00000476977 FMR1Q06787 632 aaKnown RBP eCLIP15□□□□□ -0.014e-10■■■■■ 36
GTF2IRD1-205ENST00000476977 U2AF2P26368 475 aaKnown RBP eCLIP15.47■□□□□ 0.075e-8■■■■■ 34.6
GTF2IRD1-205ENST00000476977 SF3B4Q15427 424 aaKnown RBP eCLIP14.4□□□□□ -0.111e-6■■■■■ 34.5
GTF2IRD1-205ENST00000476977 AQRO60306 1485 aaKnown RBP eCLIP18.49■□□□□ 0.551e-6■■■■■ 28.3
GTF2IRD1-205ENST00000476977 RBFOX2O43251 390 aaKnown RBP eCLIP12.22□□□□□ -0.452e-7■■■■■ 28.1
GTF2IRD1-205ENST00000476977 PRPF4O43172 522 aaKnown RBP eCLIP15.71■□□□□ 0.112e-7■■■■■ 27.9
GTF2IRD1-205ENST00000476977 AGGF1Q8N302 714 aaeCLIP14.61□□□□□ -0.071e-7■■■■■ 27.7
GTF2IRD1-205ENST00000476977 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.53□□□□□ -0.561e-11■■■■□ 25
GTF2IRD1-205ENST00000476977 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.8■□□□□ 0.442e-6■■■■□ 20.9
GTF2IRD1-205ENST00000476977 SF3A3Q12874 501 aaKnown RBP eCLIP15.69■□□□□ 0.11e-7■■■■□ 20.7
GTF2IRD1-205ENST00000476977 EFTUD2Q15029 972 aaKnown RBP eCLIP15.29■□□□□ 0.042e-6■■■■□ 19.9
GTF2IRD1-205ENST00000476977 YBX3P16989 372 aaKnown RBP eCLIP15.07■□□□□ 09e-6■■■□□ 18.6
GTF2IRD1-205ENST00000476977 DKC1O60832 514 aaKnown RBP eCLIP16.73■□□□□ 0.273e-7■■■□□ 18.2
GTF2IRD1-205ENST00000476977 RBM22Q9NW64 420 aaKnown RBP eCLIP15.16■□□□□ 0.023e-8■■■□□ 18.2
GTF2IRD1-205ENST00000476977 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.41■□□□□ 0.061e-6■■■□□ 17.2
GTF2IRD1-205ENST00000476977 HNRNPLP14866 589 aaKnown RBP eCLIP14.5□□□□□ -0.092e-8■■■□□ 16.5
GTF2IRD1-205ENST00000476977 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.91■□□□□ 0.142e-6■■■□□ 16.1
GTF2IRD1-205ENST00000476977 TIAL1Q01085 375 aaKnown RBP eCLIP12.58□□□□□ -0.44e-6■■■□□ 15.5
GTF2IRD1-205ENST00000476977 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.59■□□□□ 0.893e-9■■□□□ 14
GTF2IRD1-205ENST00000476977 PPIGQ13427 754 aaKnown RBP eCLIP15.43■□□□□ 0.063e-7■■□□□ 13.8
GTF2IRD1-205ENST00000476977 DDX3XO00571 662 aaKnown RBP eCLIP14.64□□□□□ -0.074e-6■■□□□ 12.4
GTF2IRD1-205ENST00000476977 KHSRPQ92945 711 aaKnown RBP eCLIP13.44□□□□□ -0.261e-6■■□□□ 12
Retrieved 29 of 29 RNA–protein pairs in 19.7 ms