RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 SUB1P53999 127 aaKnown RBP eCLIP8.4□□□□□ -1.062e-57■■■■■ 200.7
CKS1B-206ENST00000474215 UPF1Q92900 1129 aaKnown RBP eCLIP15.86■□□□□ 0.132e-28■■■□□ 15.7
CKS1B-206ENST00000474215 PABPC4Q13310 644 aaKnown RBP eCLIP13.48□□□□□ -0.253e-23■□□□□ 9
CKS1B-206ENST00000474215 TIA1P31483 386 aaKnown RBP eCLIP10.3□□□□□ -0.762e-18■■□□□ 13.7
CKS1B-206ENST00000474215 NOLC1Q14978 699 aaKnown RBP eCLIP12.23□□□□□ -0.453e-12■■■■□ 22
CKS1B-206ENST00000474215 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.28□□□□□ -0.765e-12■□□□□ 8.1
CKS1B-206ENST00000474215 DDX6P26196 483 aaKnown RBP eCLIP11.93□□□□□ -0.52e-10■■■□□ 16
CKS1B-206ENST00000474215 QKIQ96PU8 341 aaKnown RBP eCLIP11.12□□□□□ -0.632e-10■■■■■ 36
CKS1B-206ENST00000474215 LARP4Q71RC2 724 aaKnown RBP eCLIP10.22□□□□□ -0.776e-9■■■□□ 18.1
CKS1B-206ENST00000474215 RPS3P23396 243 aaKnown RBP eCLIP10.83□□□□□ -0.683e-8■■■■■ 30.3
CKS1B-206ENST00000474215 SF3B4Q15427 424 aaKnown RBP eCLIP10.19□□□□□ -0.784e-8■□□□□ 8.6
CKS1B-206ENST00000474215 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.73□□□□□ -0.214e-8■■■■□ 19.8
CKS1B-206ENST00000474215 SF3A3Q12874 501 aaKnown RBP eCLIP9.85□□□□□ -0.833e-6■□□□□ 9.9
Retrieved 13 of 13 RNA–protein pairs in 10.5 ms