RNA: ENST00000472628.1

RPL23A-205, Transcript of ribosomal protein L23a, humanhuman

TSL 1 (best) BASIC

Gene RPL23A, Length 639 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL23A-205ENST00000472628 NOLC1Q14978 699 aaKnown RBP eCLIP12.12□□□□□ -0.476e-40■■■■■ 143.2
RPL23A-205ENST00000472628 SF3B1O75533 1304 aaKnown RBP eCLIP11.98□□□□□ -0.495e-10■■■■■ 120.6
RPL23A-205ENST00000472628 NIP7Q9Y221 180 aaKnown RBP eCLIP14.29□□□□□ -0.126e-26■■■■■ 58.8
RPL23A-205ENST00000472628 AATFQ9NY61 560 aaKnown RBP eCLIP13.48□□□□□ -0.253e-28■■■■■ 46.6
RPL23A-205ENST00000472628 SMNDC1O75940 238 aaKnown RBP eCLIP9.87□□□□□ -0.836e-41■■■■■ 44.3
RPL23A-205ENST00000472628 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.26□□□□□ -0.611e-6■■■■■ 33.9
RPL23A-205ENST00000472628 NIPBLQ6KC79 2804 aaeCLIP9.13□□□□□ -0.954e-8■■■■■ 30.7
RPL23A-205ENST00000472628 PTBP1P26599 531 aaKnown RBP eCLIP8.64□□□□□ -1.033e-27■■■■■ 28.2
RPL23A-205ENST00000472628 SF3A3Q12874 501 aaKnown RBP eCLIP10.26□□□□□ -0.775e-11■■■■■ 28
RPL23A-205ENST00000472628 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.62□□□□□ -0.714e-11■■■■■ 27.3
RPL23A-205ENST00000472628 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.85□□□□□ -0.513e-7■■■■□ 26.7
RPL23A-205ENST00000472628 DKC1O60832 514 aaKnown RBP eCLIP12.36□□□□□ -0.432e-18■■■■□ 25.6
RPL23A-205ENST00000472628 SF3B4Q15427 424 aaKnown RBP eCLIP9.89□□□□□ -0.831e-21■■■■□ 24.8
RPL23A-205ENST00000472628 AQRO60306 1485 aaKnown RBP eCLIP19.2■□□□□ 0.666e-9■■■■□ 24.4
RPL23A-205ENST00000472628 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.87□□□□□ -0.031e-17■■■■□ 22.8
RPL23A-205ENST00000472628 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.83□□□□□ -0.362e-13■■■■□ 22.5
RPL23A-205ENST00000472628 SSBP05455 408 aaKnown RBP eCLIP12.33□□□□□ -0.442e-10■■■■□ 20.3
RPL23A-205ENST00000472628 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.43□□□□□ -0.426e-8■■■□□ 17.5
RPL23A-205ENST00000472628 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.72□□□□□ -0.539e-8■■■□□ 17.4
RPL23A-205ENST00000472628 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.21□□□□□ -0.779e-62■■■□□ 16.5
RPL23A-205ENST00000472628 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.01□□□□□ -0.659e-8■■■□□ 15.8
RPL23A-205ENST00000472628 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.27■□□□□ 0.28e-9■■■□□ 15.2
RPL23A-205ENST00000472628 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.93□□□□□ -0.55e-13■■■□□ 15.2
RPL23A-205ENST00000472628 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.77□□□□□ -0.692e-27■■■□□ 15.1
RPL23A-205ENST00000472628 XRCC6P12956 609 aaKnown RBP eCLIP12.35□□□□□ -0.432e-19■■■□□ 14.6
RPL23A-205ENST00000472628 TRA2AQ13595 282 aaKnown RBP eCLIP10.71□□□□□ -0.698e-8■■□□□ 14.3
RPL23A-205ENST00000472628 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.86□□□□□ -0.671e-7■■□□□ 14.3
RPL23A-205ENST00000472628 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10□□□□□ -0.814e-11■■□□□ 14.2
RPL23A-205ENST00000472628 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.54□□□□□ -0.564e-15■■□□□ 13.9
RPL23A-205ENST00000472628 PABPC4Q13310 644 aaKnown RBP eCLIP13.06□□□□□ -0.324e-7■■□□□ 13.8
RPL23A-205ENST00000472628 RBM22Q9NW64 420 aaKnown RBP eCLIP11.22□□□□□ -0.612e-6■■□□□ 13.6
RPL23A-205ENST00000472628 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.87■□□□□ 0.297e-8■■□□□ 13.2
RPL23A-205ENST00000472628 GPKOWQ92917 476 aaPredicted RBP eCLIP12.85□□□□□ -0.357e-8■■□□□ 13
RPL23A-205ENST00000472628 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.64■□□□□ 0.417e-15■■□□□ 12
RPL23A-205ENST00000472628 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.3□□□□□ -0.922e-10■■□□□ 11.8
RPL23A-205ENST00000472628 WDR43Q15061 677 aaKnown RBP eCLIP14.73□□□□□ -0.051e-34■■□□□ 11.8
RPL23A-205ENST00000472628 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.85□□□□□ -0.679e-22■■□□□ 11.5
RPL23A-205ENST00000472628 PUM1Q14671 1186 aaKnown RBP eCLIP11□□□□□ -0.653e-29■□□□□ 11.3
RPL23A-205ENST00000472628 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.93■□□□□ 0.39e-7■□□□□ 11.3
RPL23A-205ENST00000472628 AARSP49588 968 aaKnown RBP eCLIP11.97□□□□□ -0.493e-6■□□□□ 11.3
RPL23A-205ENST00000472628 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.4□□□□□ -0.264e-15■□□□□ 10.9
RPL23A-205ENST00000472628 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.97□□□□□ -0.494e-8■□□□□ 10
RPL23A-205ENST00000472628 TROVE2P10155 538 aaKnown RBP eCLIP10.13□□□□□ -0.791e-323■□□□□ 9.8
RPL23A-205ENST00000472628 EFTUD2Q15029 972 aaKnown RBP eCLIP10.8□□□□□ -0.684e-6■□□□□ 9.8
RPL23A-205ENST00000472628 SLBPQ14493 270 aaKnown RBP eCLIP10.55□□□□□ -0.727e-9■□□□□ 9.4
RPL23A-205ENST00000472628 DDX21Q9NR30 783 aaKnown RBP eCLIP14.35□□□□□ -0.111e-51■□□□□ 9
RPL23A-205ENST00000472628 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.2□□□□□ -0.31e-10■□□□□ 8.3
RPL23A-205ENST00000472628 YBX3P16989 372 aaKnown RBP eCLIP14.23□□□□□ -0.136e-11■□□□□ 8.2
Retrieved 48 of 48 RNA–protein pairs in 39.8 ms