RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 PRO2289Q9P1D8 64 aa3.29□□□□□ -1.88
SMC4-212ENST00000470240 HERC1Q15751 4861 aa3.28□□□□□ -1.88
SMC4-212ENST00000470240 LCE3AQ5TA76 89 aa3.24□□□□□ -1.89
SMC4-212ENST00000470240 HMCN2Q8NDA2 5059 aa3.23□□□□□ -1.89
SMC4-212ENST00000470240 MT1BP07438 61 aa3.22□□□□□ -1.89
SMC4-212ENST00000470240 PCLOQ9Y6V0 5065 aa3.21□□□□□ -1.9
SMC4-212ENST00000470240 SPRR5A0A1B0GTR4 108 aa3.21□□□□□ -1.9
SMC4-212ENST00000470240 KRTAP8-1Q8IUC2 63 aa3.19□□□□□ -1.9
SMC4-212ENST00000470240 MT1XP80297 61 aa3.18□□□□□ -1.9
SMC4-212ENST00000470240 MUC2Q02817 5179 aa3.17□□□□□ -1.9
SMC4-212ENST00000470240 KRTAP5-4Q6L8H1 288 aa3.16□□□□□ -1.9
SMC4-212ENST00000470240 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
SMC4-212ENST00000470240 KRTAP12-3P60328 96 aa3.13□□□□□ -1.91
SMC4-212ENST00000470240 LCE3EQ5T5B0 92 aa3.12□□□□□ -1.91
SMC4-212ENST00000470240 RNF213Q63HN8 5207 aa3.11□□□□□ -1.91
SMC4-212ENST00000470240 KRTAP5-9P26371 169 aa3.06□□□□□ -1.92
SMC4-212ENST00000470240 UBR4Q5T4S7 5183 aa3.04□□□□□ -1.92
SMC4-212ENST00000470240 FAT4Q6V0I7 4981 aa3.02□□□□□ -1.93
SMC4-212ENST00000470240 KRTAP19-5Q3LI72 72 aa2.97□□□□□ -1.93
SMC4-212ENST00000470240 INE1O15225 51 aa2.91□□□□□ -1.94
SMC4-212ENST00000470240 OBSCNQ5VST9 7968 aa2.89□□□□□ -1.95
SMC4-212ENST00000470240 KRTAP4-3Q9BYR4 195 aa2.87□□□□□ -1.95
SMC4-212ENST00000470240 KRTAP19-6Q3LI70 58 aa2.82□□□□□ -1.96
SMC4-212ENST00000470240 KRTAP19-7Q3SYF9 63 aa2.82□□□□□ -1.96
SMC4-212ENST00000470240 MT1EP04732 61 aa2.79□□□□□ -1.96
SMC4-212ENST00000470240 MT1LQ93083 61 aa2.78□□□□□ -1.96
SMC4-212ENST00000470240 KRTAP5-5Q701N2 237 aaPredicted RBP2.67□□□□□ -1.98
SMC4-212ENST00000470240 USH2AO75445 5202 aa2.67□□□□□ -1.98
SMC4-212ENST00000470240 KRTAP2-3P0C7H8 128 aa2.66□□□□□ -1.98
SMC4-212ENST00000470240 MT1GP13640 62 aa2.66□□□□□ -1.98
SMC4-212ENST00000470240 KRTAP2-4Q9BYR9 128 aa2.66□□□□□ -1.98
SMC4-212ENST00000470240 KRTAP2-1Q9BYU5 128 aa2.66□□□□□ -1.98
SMC4-212ENST00000470240 KRTAP19-3Q7Z4W3 81 aa2.65□□□□□ -1.99
SMC4-212ENST00000470240 MT1MQ8N339 61 aa2.61□□□□□ -1.99
SMC4-212ENST00000470240 SSPOA2VEC9 5147 aa2.59□□□□□ -1.99
SMC4-212ENST00000470240 SPRR2FQ96RM1 72 aa2.58□□□□□ -2
SMC4-212ENST00000470240 LCE1CQ5T751 118 aa2.56□□□□□ -2
SMC4-212ENST00000470240 LCE1BQ5T7P3 118 aa2.56□□□□□ -2
SMC4-212ENST00000470240 KRTAP5-2Q701N4 177 aa2.55□□□□□ -2
SMC4-212ENST00000470240 KMT2DO14686 5537 aa2.54□□□□□ -2
SMC4-212ENST00000470240 LCE3DQ9BYE3 92 aa2.52□□□□□ -2.01
SMC4-212ENST00000470240 CRCT1Q9UGL9 99 aa2.52□□□□□ -2.01
SMC4-212ENST00000470240 FSIP2Q5CZC0 6907 aa2.42□□□□□ -2.02
SMC4-212ENST00000470240 FCGBPQ9Y6R7 5405 aaPredicted RBP2.4□□□□□ -2.02
SMC4-212ENST00000470240 SPRR2EP22531 72 aa2.4□□□□□ -2.03
SMC4-212ENST00000470240 SPRR2BP35325 72 aa2.4□□□□□ -2.03
SMC4-212ENST00000470240 SPRR2AP35326 72 aa2.4□□□□□ -2.03
SMC4-212ENST00000470240 MT1AP04731 61 aa2.39□□□□□ -2.03
SMC4-212ENST00000470240 KRTAP12-4P60329 112 aa2.36□□□□□ -2.03
SMC4-212ENST00000470240 MACF1Q9UPN3 7388 aaKnown RBP2.35□□□□□ -2.03
SMC4-212ENST00000470240 SPRR2DP22532 72 aa2.31□□□□□ -2.04
SMC4-212ENST00000470240 KRTAP6-1Q3LI64 71 aa2.31□□□□□ -2.04
SMC4-212ENST00000470240 KRTAP6-3Q3LI67 103 aa2.28□□□□□ -2.04
SMC4-212ENST00000470240 MUC12Q9UKN1 5478 aa2.26□□□□□ -2.05
SMC4-212ENST00000470240 DSTQ03001 7570 aaKnown RBP2.22□□□□□ -2.05
SMC4-212ENST00000470240 SYNE2Q8WXH0 6885 aaKnown RBP2.2□□□□□ -2.06
SMC4-212ENST00000470240 KRTAP5-8O75690 187 aa2.12□□□□□ -2.07
SMC4-212ENST00000470240 KRTAP6-2Q3LI66 62 aa2.11□□□□□ -2.07
SMC4-212ENST00000470240 SYNE1Q8NF91 8797 aaKnown RBP2.1□□□□□ -2.07
SMC4-212ENST00000470240 KRTAP5-7Q6L8G8 165 aa2.09□□□□□ -2.07
SMC4-212ENST00000470240 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
SMC4-212ENST00000470240 PRM1P04553 51 aa2.07□□□□□ -2.08
SMC4-212ENST00000470240 MDN1Q9NU22 5596 aa2.02□□□□□ -2.09
SMC4-212ENST00000470240 NEBP20929 6669 aa1.98□□□□□ -2.09
SMC4-212ENST00000470240 MT4P47944 62 aa1.98□□□□□ -2.09
SMC4-212ENST00000470240 KRTAP20-2Q3LI61 65 aa1.94□□□□□ -2.1
SMC4-212ENST00000470240 KRTAP20-1Q3LI63 56 aa1.91□□□□□ -2.1
SMC4-212ENST00000470240 HMCN1Q96RW7 5635 aa1.88□□□□□ -2.11
SMC4-212ENST00000470240 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
SMC4-212ENST00000470240 KRTAP5-10Q6L8G5 202 aa1.64□□□□□ -2.15
SMC4-212ENST00000470240 MUC5ACP98088 5654 aa1.58□□□□□ -2.16
SMC4-212ENST00000470240 AHNAK2Q8IVF2 5795 aa1.34□□□□□ -2.19
SMC4-212ENST00000470240 KRTAP21-1Q3LI58 79 aa1.29□□□□□ -2.2
SMC4-212ENST00000470240 PHGR1C9JFL3 82 aa1.23□□□□□ -2.21
SMC4-212ENST00000470240 GPR98Q8WXG9 6306 aa1.2□□□□□ -2.22
SMC4-212ENST00000470240 MUC5BQ9HC84 5762 aaPredicted RBP1.19□□□□□ -2.22
SMC4-212ENST00000470240 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
SMC4-212ENST00000470240 AHNAKQ09666 5890 aaKnown RBP0.93□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 98.3 ms