RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.92□□□□□ -0.821e-147■■■■■ 345.5
SMC4-210ENST00000469762 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.58□□□□□ -0.562e-144■■■■■ 553.7
SMC4-210ENST00000469762 YWHAGP61981 247 aaKnown RBP eCLIP10.7□□□□□ -0.71e-117■■■■■ 400.8
SMC4-210ENST00000469762 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.75□□□□□ -0.694e-98■■■■■ 943.1
SMC4-210ENST00000469762 LSM11P83369 360 aaKnown RBP eCLIP9.82□□□□□ -0.847e-97■■■■■ 245.7
SMC4-210ENST00000469762 AGGF1Q8N302 714 aaeCLIP10.89□□□□□ -0.672e-85■■■■■ 286.7
SMC4-210ENST00000469762 DDX3XO00571 662 aaKnown RBP eCLIP11.26□□□□□ -0.614e-78■■■■■ 527.9
SMC4-210ENST00000469762 RBM15Q96T37 977 aaKnown RBP eCLIP10.93□□□□□ -0.665e-67■■■■■ 212.6
SMC4-210ENST00000469762 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.82□□□□□ -0.366e-65■■■■■ 143.5
SMC4-210ENST00000469762 RPS3P23396 243 aaKnown RBP eCLIP9.99□□□□□ -0.817e-64■■■■■ 337.8
SMC4-210ENST00000469762 AARSP49588 968 aaKnown RBP eCLIP11.6□□□□□ -0.553e-49■■■■■ 252.4
SMC4-210ENST00000469762 GTF2F1P35269 517 aaKnown RBP eCLIP12.39□□□□□ -0.438e-49■■■■■ 172.1
SMC4-210ENST00000469762 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.87□□□□□ -0.675e-47■■■■■ 274.1
SMC4-210ENST00000469762 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.07□□□□□ -0.487e-44■■■■■ 137.4
SMC4-210ENST00000469762 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.83□□□□□ -0.842e-41■■■■■ 207.1
SMC4-210ENST00000469762 G3BP1Q13283 466 aaKnown RBP eCLIP12.15□□□□□ -0.461e-39■■■■■ 140
SMC4-210ENST00000469762 HLTFQ14527 1009 aaKnown RBP eCLIP11.25□□□□□ -0.615e-35■■■■■ 127.1
SMC4-210ENST00000469762 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.88□□□□□ -0.674e-34■■■■■ 131.8
SMC4-210ENST00000469762 DDX21Q9NR30 783 aaKnown RBP eCLIP12.14□□□□□ -0.471e-26■■■■■ 198.7
SMC4-210ENST00000469762 TAF15Q92804 592 aaKnown RBP eCLIP8.7□□□□□ -1.027e-26■■■■□ 25.9
SMC4-210ENST00000469762 AKAP1Q92667 903 aaKnown RBP eCLIP9.64□□□□□ -0.874e-24■■■■■ 140.6
SMC4-210ENST00000469762 RBM22Q9NW64 420 aaKnown RBP eCLIP10.28□□□□□ -0.765e-24■■■■■ 66.5
SMC4-210ENST00000469762 HNRNPUQ00839 825 aaKnown RBP eCLIP14.38□□□□□ -0.112e-22■■■■■ 68.1
SMC4-210ENST00000469762 WDR43Q15061 677 aaKnown RBP eCLIP13.44□□□□□ -0.265e-20■■■■■ 85.2
SMC4-210ENST00000469762 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.46□□□□□ -0.733e-18■■■■■ 78.4
SMC4-210ENST00000469762 LARP4Q71RC2 724 aaKnown RBP eCLIP10.37□□□□□ -0.751e-17■■■■□ 24.2
SMC4-210ENST00000469762 NCBP2P52298 156 aaKnown RBP eCLIP9.61□□□□□ -0.872e-17■■■■■ 76.5
SMC4-210ENST00000469762 RPS11P62280 158 aaKnown RBP eCLIP9.55□□□□□ -0.888e-17■■■■■ 578.9
SMC4-210ENST00000469762 SSBP05455 408 aaKnown RBP eCLIP11.24□□□□□ -0.619e-17■■■■■ 55.5
SMC4-210ENST00000469762 EIF3DO15371 548 aaKnown RBP eCLIP11.11□□□□□ -0.632e-16■■■■■ 56.2
SMC4-210ENST00000469762 SMNDC1O75940 238 aaKnown RBP eCLIP10.97□□□□□ -0.652e-16■■■■■ 67.6
SMC4-210ENST00000469762 NOLC1Q14978 699 aaKnown RBP eCLIP12.4□□□□□ -0.424e-16■■■■■ 30.2
SMC4-210ENST00000469762 HNRNPLP14866 589 aaKnown RBP eCLIP10.41□□□□□ -0.742e-15■■■■■ 47.4
SMC4-210ENST00000469762 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.73□□□□□ -0.856e-15■■■■■ 66.6
SMC4-210ENST00000469762 GRSF1Q12849 480 aaKnown RBP eCLIP10.27□□□□□ -0.772e-14■■■■■ 48.8
SMC4-210ENST00000469762 ILF3Q12906 894 aaKnown RBP eCLIP9.38□□□□□ -0.918e-14■■■■■ 40.3
SMC4-210ENST00000469762 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.96□□□□□ -0.821e-13■■■■■ 65.9
SMC4-210ENST00000469762 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.24□□□□□ -0.772e-13■■■■■ 56.3
SMC4-210ENST00000469762 GPKOWQ92917 476 aaPredicted RBP eCLIP11.53□□□□□ -0.562e-13■□□□□ 9.3
SMC4-210ENST00000469762 HNRNPKP61978 463 aaKnown RBP eCLIP8.91□□□□□ -0.985e-13■■■■■ 46
SMC4-210ENST00000469762 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.87□□□□□ -0.675e-13■■■■■ 220.5
SMC4-210ENST00000469762 EIF3GO75821 320 aaKnown RBP eCLIP9.11□□□□□ -0.958e-13■■■■■ 59.2
SMC4-210ENST00000469762 TROVE2P10155 538 aaKnown RBP eCLIP10.77□□□□□ -0.681e-12■■■■■ 61.2
SMC4-210ENST00000469762 PCBP1Q15365 356 aaKnown RBP eCLIP10.24□□□□□ -0.773e-12■■■■□ 20.8
SMC4-210ENST00000469762 U2AF1Q01081 240 aaKnown RBP eCLIP13.08□□□□□ -0.325e-12■■■■■ 47.2
SMC4-210ENST00000469762 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.66□□□□□ -0.867e-12■■■■■ 38.5
SMC4-210ENST00000469762 UPF1Q92900 1129 aaKnown RBP eCLIP9.85□□□□□ -0.831e-11■■■■□ 26.2
SMC4-210ENST00000469762 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.94□□□□□ -0.52e-10■■■□□ 18.8
SMC4-210ENST00000469762 FXR2P51116 673 aaKnown RBP eCLIP11.36□□□□□ -0.592e-10■■■■■ 37.2
SMC4-210ENST00000469762 SUB1P53999 127 aaKnown RBP eCLIP8.17□□□□□ -1.15e-10■■■■■ 33.9
SMC4-210ENST00000469762 HNRNPMP52272 730 aaKnown RBP eCLIP13.77□□□□□ -0.212e-9■□□□□ 8.7
SMC4-210ENST00000469762 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.25□□□□□ -0.612e-9■■■■■ 75.2
SMC4-210ENST00000469762 SAFBQ15424 915 aaKnown RBP eCLIP11.68□□□□□ -0.542e-9■■□□□ 11.5
SMC4-210ENST00000469762 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.67□□□□□ -0.063e-9■■■■■ 72.1
SMC4-210ENST00000469762 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.27□□□□□ -0.934e-9■■■■■ 118.1
SMC4-210ENST00000469762 SND1Q7KZF4 910 aaKnown RBP eCLIP11.46□□□□□ -0.576e-9■■■■■ 32.8
SMC4-210ENST00000469762 PABPC4Q13310 644 aaKnown RBP eCLIP11.2□□□□□ -0.628e-9■■■■■ 603.5
SMC4-210ENST00000469762 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.28□□□□□ -0.61e-8■■■■■ 54.3
SMC4-210ENST00000469762 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.26□□□□□ -0.611e-8■■■■■ 268.2
SMC4-210ENST00000469762 NONOQ15233 471 aaKnown RBP eCLIP11.38□□□□□ -0.592e-8■■■■■ 98.1
SMC4-210ENST00000469762 RBFOX2O43251 390 aaKnown RBP eCLIP8.61□□□□□ -1.033e-8■■■■■ 54.1
SMC4-210ENST00000469762 AATFQ9NY61 560 aaKnown RBP eCLIP11.71□□□□□ -0.534e-8■■■■■ 116
SMC4-210ENST00000469762 AQRO60306 1485 aaKnown RBP eCLIP14.65□□□□□ -0.074e-8■■■■■ 71.8
SMC4-210ENST00000469762 SF3B4Q15427 424 aaKnown RBP eCLIP10.05□□□□□ -0.85e-8■■■■□ 22.8
SMC4-210ENST00000469762 ZNF622Q969S3 477 aaKnown RBP eCLIP10.81□□□□□ -0.685e-8■■□□□ 11.5
SMC4-210ENST00000469762 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.76□□□□□ -0.535e-8■■■□□ 16.4
SMC4-210ENST00000469762 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.92□□□□□ -0.56e-8■■■■□ 23.9
SMC4-210ENST00000469762 MATR3P43243 847 aaKnown RBP eCLIP11.43□□□□□ -0.587e-8■■□□□ 11.8
SMC4-210ENST00000469762 SRSF1Q07955 248 aaKnown RBP eCLIP7.86□□□□□ -1.159e-8■■□□□ 13.7
SMC4-210ENST00000469762 EFTUD2Q15029 972 aaKnown RBP eCLIP10.9□□□□□ -0.671e-7■■□□□ 13.4
SMC4-210ENST00000469762 SF3B1O75533 1304 aaKnown RBP eCLIP10.62□□□□□ -0.711e-7■■■■■ 165.2
SMC4-210ENST00000469762 NIP7Q9Y221 180 aaKnown RBP eCLIP11.47□□□□□ -0.571e-7■■■■■ 83.2
SMC4-210ENST00000469762 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.6□□□□□ -0.231e-7■■■□□ 17.3
SMC4-210ENST00000469762 PPIGQ13427 754 aaKnown RBP eCLIP9.92□□□□□ -0.822e-7■■■■■ 57.4
SMC4-210ENST00000469762 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.57□□□□□ -0.242e-7■■■■□ 25.5
SMC4-210ENST00000469762 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.18□□□□□ -0.622e-7■■■■□ 26.2
SMC4-210ENST00000469762 TIA1P31483 386 aaKnown RBP eCLIP9.83□□□□□ -0.842e-7■■■□□ 18.7
SMC4-210ENST00000469762 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.18□□□□□ -0.783e-7■■□□□ 12.9
SMC4-210ENST00000469762 FMR1Q06787 632 aaKnown RBP eCLIP11.87□□□□□ -0.513e-7■□□□□ 10
SMC4-210ENST00000469762 SF3A3Q12874 501 aaKnown RBP eCLIP11.16□□□□□ -0.623e-7■■■■■ 122.4
SMC4-210ENST00000469762 KHSRPQ92945 711 aaKnown RBP eCLIP10.66□□□□□ -0.74e-7■■■■■ 32.8
SMC4-210ENST00000469762 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.87□□□□□ -0.675e-7■■■■□ 23.7
SMC4-210ENST00000469762 TRA2AQ13595 282 aaKnown RBP eCLIP8.59□□□□□ -1.035e-7■■□□□ 14
SMC4-210ENST00000469762 U2AF2P26368 475 aaKnown RBP eCLIP12.21□□□□□ -0.456e-7■■■■■ 34.1
SMC4-210ENST00000469762 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.28□□□□□ -0.67e-7■■□□□ 12.7
SMC4-210ENST00000469762 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.64□□□□□ -1.197e-7■■■■■ 37.4
SMC4-210ENST00000469762 QKIQ96PU8 341 aaKnown RBP eCLIP10.58□□□□□ -0.727e-7■■■■■ 232.7
SMC4-210ENST00000469762 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.92□□□□□ -0.57e-7■■■■□ 21.2
SMC4-210ENST00000469762 ZC3H11AO75152 810 aaKnown RBP eCLIP10.85□□□□□ -0.678e-7■■■■■ 110
SMC4-210ENST00000469762 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.93□□□□□ -0.661e-6■■■■■ 406.9
SMC4-210ENST00000469762 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.05□□□□□ -0.641e-6■■■■■ 397.5
SMC4-210ENST00000469762 NIPBLQ6KC79 2804 aaeCLIP7.39□□□□□ -1.232e-6■■■■■ 27.8
SMC4-210ENST00000469762 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.88□□□□□ -0.832e-6■■■■■ 54.3
SMC4-210ENST00000469762 TARDBPQ13148 414 aaKnown RBP eCLIP9.74□□□□□ -0.853e-6■■■■□ 21.4
SMC4-210ENST00000469762 CPSF6Q16630 551 aaKnown RBP eCLIP9.99□□□□□ -0.814e-6■■■□□ 15.6
SMC4-210ENST00000469762 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.75□□□□□ -0.857e-6■■■□□ 17.7
SMC4-210ENST00000469762 EIF3HO15372 352 aaKnown RBP eCLIP11.44□□□□□ -0.588e-6■□□□□ 10.6
Retrieved 97 of 97 RNA–protein pairs in 61 ms