RNA: ENST00000469566.5

SELENOF-205, Transcript of selenoprotein F, humanhuman

TSL 2

Gene SELENOF, Length 831 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SELENOF-205ENST00000469566 SF3B1O75533 1304 aaKnown RBP eCLIP10.48□□□□□ -0.731e-14■■■■■ 180.9
SELENOF-205ENST00000469566 PTBP1P26599 531 aaKnown RBP eCLIP7.18□□□□□ -1.262e-21■■■■■ 83.2
SELENOF-205ENST00000469566 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.55□□□□□ -0.243e-11■■■■■ 36.9
SELENOF-205ENST00000469566 SUB1P53999 127 aaKnown RBP eCLIP7.05□□□□□ -1.285e-7■■■■■ 33
SELENOF-205ENST00000469566 MATR3P43243 847 aaKnown RBP eCLIP10.46□□□□□ -0.732e-8■■■■■ 30.8
SELENOF-205ENST00000469566 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.93□□□□□ -0.665e-8■■■■■ 30.2
SELENOF-205ENST00000469566 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.99□□□□□ -0.974e-9■■■■■ 29.8
SELENOF-205ENST00000469566 TIA1P31483 386 aaKnown RBP eCLIP8.77□□□□□ -1.016e-9■■■■■ 27
SELENOF-205ENST00000469566 PABPC4Q13310 644 aaKnown RBP eCLIP11.52□□□□□ -0.573e-6■■■■□ 26.6
SELENOF-205ENST00000469566 QKIQ96PU8 341 aaKnown RBP eCLIP9.48□□□□□ -0.894e-10■■■■□ 26.4
SELENOF-205ENST00000469566 TARDBPQ13148 414 aaKnown RBP eCLIP9.64□□□□□ -0.873e-7■■■■□ 25.8
SELENOF-205ENST00000469566 RPS3P23396 243 aaKnown RBP eCLIP9.22□□□□□ -0.931e-10■■■■□ 23.5
SELENOF-205ENST00000469566 SND1Q7KZF4 910 aaKnown RBP eCLIP9.82□□□□□ -0.841e-8■■■■□ 22.9
SELENOF-205ENST00000469566 UPF1Q92900 1129 aaKnown RBP eCLIP13.77□□□□□ -0.218e-9■■■■□ 22.2
SELENOF-205ENST00000469566 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.62■□□□□ 0.094e-8■■■■□ 19.7
SELENOF-205ENST00000469566 U2AF2P26368 475 aaKnown RBP eCLIP10.65□□□□□ -0.71e-10■■■■□ 19.5
SELENOF-205ENST00000469566 DDX6P26196 483 aaKnown RBP eCLIP10.18□□□□□ -0.782e-6■■■□□ 18.7
SELENOF-205ENST00000469566 PCBP2Q15366 365 aaKnown RBP eCLIP8.9□□□□□ -0.982e-8■■■□□ 18.6
SELENOF-205ENST00000469566 DDX3XO00571 662 aaKnown RBP eCLIP9.77□□□□□ -0.854e-16■■■□□ 16.5
SELENOF-205ENST00000469566 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.4□□□□□ -0.91e-8■■■□□ 16.4
SELENOF-205ENST00000469566 HNRNPMP52272 730 aaKnown RBP eCLIP15.31■□□□□ 0.043e-16■■■□□ 16.1
SELENOF-205ENST00000469566 KHSRPQ92945 711 aaKnown RBP eCLIP11.76□□□□□ -0.531e-6■■■□□ 15.6
SELENOF-205ENST00000469566 EFTUD2Q15029 972 aaKnown RBP eCLIP9.05□□□□□ -0.963e-8■■□□□ 13.7
SELENOF-205ENST00000469566 YBX3P16989 372 aaKnown RBP eCLIP12.83□□□□□ -0.367e-7■■□□□ 13
SELENOF-205ENST00000469566 FTOQ9C0B1 505 aaKnown RBP eCLIP10.97□□□□□ -0.651e-9■■□□□ 12.7
SELENOF-205ENST00000469566 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.77□□□□□ -0.048e-8■■□□□ 11.8
SELENOF-205ENST00000469566 HNRNPLP14866 589 aaKnown RBP eCLIP10.09□□□□□ -0.792e-6■□□□□ 10.8
SELENOF-205ENST00000469566 U2AF1Q01081 240 aaKnown RBP eCLIP12.84□□□□□ -0.351e-9■□□□□ 10.5
SELENOF-205ENST00000469566 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.74□□□□□ -1.017e-7■□□□□ 10.3
SELENOF-205ENST00000469566 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.09□□□□□ -0.639e-7■□□□□ 10.2
SELENOF-205ENST00000469566 TIAL1Q01085 375 aaKnown RBP eCLIP9.18□□□□□ -0.949e-7■□□□□ 9.8
SELENOF-205ENST00000469566 AGGF1Q8N302 714 aaeCLIP9.26□□□□□ -0.931e-6■□□□□ 9.1
SELENOF-205ENST00000469566 LARP4Q71RC2 724 aaKnown RBP eCLIP8.71□□□□□ -1.022e-8■□□□□ 8.8
Retrieved 33 of 33 RNA–protein pairs in 18.4 ms